Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Particl-201ENSMUST00000205370 1560 ntBASIC20.65■□□□□ 0.9
Trbv20A0A0B4J1H5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trbv20A0A0B4J1H5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trbv20A0A0B4J1H5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trbv20A0A0B4J1H5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Trbv20A0A0B4J1H5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.64■□□□□ 0.9
Trbv20A0A0B4J1H5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.64■□□□□ 0.9
Trbv20A0A0B4J1H5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trbv20A0A0B4J1H5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trbv20A0A0B4J1H5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trbv20A0A0B4J1H5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv20A0A0B4J1H5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 Gm16148-201ENSMUST00000119653 893 ntBASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trbv20A0A0B4J1H5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.61■□□□□ 0.89
Trbv20A0A0B4J1H5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv20A0A0B4J1H5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trbv20A0A0B4J1H5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv20A0A0B4J1H5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv20A0A0B4J1H5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv20A0A0B4J1H5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv20A0A0B4J1H5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv20A0A0B4J1H5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv20A0A0B4J1H5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Trbv20A0A0B4J1H5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trbv20A0A0B4J1H5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trbv20A0A0B4J1H5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv20A0A0B4J1H5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv20A0A0B4J1H5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Trbv20A0A0B4J1H5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Trbv20A0A0B4J1H5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Trbv20A0A0B4J1H5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv20A0A0B4J1H5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv20A0A0B4J1H5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv20A0A0B4J1H5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv20A0A0B4J1H5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv20A0A0B4J1H5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.54■□□□□ 0.88
Trbv20A0A0B4J1H5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trbv20A0A0B4J1H5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trbv20A0A0B4J1H5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv20A0A0B4J1H5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trbv20A0A0B4J1H5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv20A0A0B4J1H5 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv20A0A0B4J1H5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Trbv20A0A0B4J1H5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Trbv20A0A0B4J1H5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv20A0A0B4J1H5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv20A0A0B4J1H5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trbv20A0A0B4J1H5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trbv20A0A0B4J1H5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Trbv20A0A0B4J1H5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv20A0A0B4J1H5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Trbv20A0A0B4J1H5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trbv20A0A0B4J1H5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv20A0A0B4J1H5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv20A0A0B4J1H5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv20A0A0B4J1H5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trbv20A0A0B4J1H5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv20A0A0B4J1H5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv20A0A0B4J1H5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.49■□□□□ 0.87
Trbv20A0A0B4J1H5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv20A0A0B4J1H5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv20A0A0B4J1H5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv20A0A0B4J1H5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trbv20A0A0B4J1H5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv20A0A0B4J1H5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trbv20A0A0B4J1H5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.48■□□□□ 0.87
Trbv20A0A0B4J1H5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv20A0A0B4J1H5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv20A0A0B4J1H5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv20A0A0B4J1H5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv20A0A0B4J1H5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trbv20A0A0B4J1H5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trbv20A0A0B4J1H5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv20A0A0B4J1H5 Gm24804-201ENSMUST00000174982 85 ntBASIC20.46■□□□□ 0.87
Trbv20A0A0B4J1H5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv20A0A0B4J1H5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv20A0A0B4J1H5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms