Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Particl-201ENSMUST00000205370 1560 ntBASIC18.01■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.01■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.98■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.98■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv13-3A0A0B4J1H2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv13-3A0A0B4J1H2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.95■□□□□ 0.46
Trbv13-3A0A0B4J1H2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv13-3A0A0B4J1H2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.93■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.91■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv13-3A0A0B4J1H2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Gm26115-201ENSMUST00000175605 87 ntBASIC17.9■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv13-3A0A0B4J1H2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.87■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv13-3A0A0B4J1H2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trbv13-3A0A0B4J1H2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.83■□□□□ 0.45
Trbv13-3A0A0B4J1H2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.83■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trbv13-3A0A0B4J1H2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms