Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv12-1A0A0B4J1H0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.49■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.48■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.47■□□□□ 0.87
Trbv12-1A0A0B4J1H0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.47■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv12-1A0A0B4J1H0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Gm9812-201ENSMUST00000061934 968 ntBASIC20.45■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.44■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.44■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.44■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv12-1A0A0B4J1H0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv12-1A0A0B4J1H0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.4■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Gm45364-201ENSMUST00000210883 159 ntBASIC20.4■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trbv12-1A0A0B4J1H0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trbv12-1A0A0B4J1H0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv12-1A0A0B4J1H0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.38■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.38■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.37■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.36■□□□□ 0.85
Trbv12-1A0A0B4J1H0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.35■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv12-1A0A0B4J1H0 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.35■□□□□ 0.85
Trbv12-1A0A0B4J1H0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.33■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trbv12-1A0A0B4J1H0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Trbv12-1A0A0B4J1H0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.32■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.31■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.31■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv12-1A0A0B4J1H0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv12-1A0A0B4J1H0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.29■□□□□ 0.84
Trbv12-1A0A0B4J1H0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms