Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trbv3A0A0A6YYE2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv3A0A0A6YYE2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.77■□□□□ 0.43
Trbv3A0A0A6YYE2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.77■□□□□ 0.43
Trbv3A0A0A6YYE2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv3A0A0A6YYE2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv3A0A0A6YYE2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trbv3A0A0A6YYE2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv3A0A0A6YYE2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv3A0A0A6YYE2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trbv3A0A0A6YYE2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.75■□□□□ 0.43
Trbv3A0A0A6YYE2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv3A0A0A6YYE2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trbv3A0A0A6YYE2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trbv3A0A0A6YYE2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv3A0A0A6YYE2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv3A0A0A6YYE2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trbv3A0A0A6YYE2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv3A0A0A6YYE2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv3A0A0A6YYE2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trbv3A0A0A6YYE2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trbv3A0A0A6YYE2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv3A0A0A6YYE2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv3A0A0A6YYE2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv3A0A0A6YYE2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trbv3A0A0A6YYE2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.72■□□□□ 0.43
Trbv3A0A0A6YYE2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv3A0A0A6YYE2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv3A0A0A6YYE2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.71■□□□□ 0.43
Trbv3A0A0A6YYE2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trbv3A0A0A6YYE2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trbv3A0A0A6YYE2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv3A0A0A6YYE2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv3A0A0A6YYE2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv3A0A0A6YYE2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv3A0A0A6YYE2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv3A0A0A6YYE2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv3A0A0A6YYE2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.69■□□□□ 0.42
Trbv3A0A0A6YYE2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv3A0A0A6YYE2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv3A0A0A6YYE2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv3A0A0A6YYE2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv3A0A0A6YYE2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.68■□□□□ 0.42
Trbv3A0A0A6YYE2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv3A0A0A6YYE2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv3A0A0A6YYE2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbv3A0A0A6YYE2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv3A0A0A6YYE2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv3A0A0A6YYE2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv3A0A0A6YYE2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv3A0A0A6YYE2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv3A0A0A6YYE2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv3A0A0A6YYE2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trbv3A0A0A6YYE2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv3A0A0A6YYE2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv3A0A0A6YYE2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv3A0A0A6YYE2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv3A0A0A6YYE2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv3A0A0A6YYE2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv3A0A0A6YYE2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv3A0A0A6YYE2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv3A0A0A6YYE2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv3A0A0A6YYE2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv3A0A0A6YYE2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trbv3A0A0A6YYE2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv3A0A0A6YYE2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv3A0A0A6YYE2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv3A0A0A6YYE2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv3A0A0A6YYE2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trbv3A0A0A6YYE2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv3A0A0A6YYE2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv3A0A0A6YYE2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv3A0A0A6YYE2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms