Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.11■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.08■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.08■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sirpb1bA0A0A6YXN8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Sirpb1bA0A0A6YXN8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.06■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.06■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.06■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Mir6538-201ENSMUST00000183713 110 ntBASIC20.05■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sirpb1bA0A0A6YXN8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Gm11175-201ENSMUST00000116172 543 ntBASIC20.02■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sirpb1bA0A0A6YXN8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Sirpb1bA0A0A6YXN8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sirpb1bA0A0A6YXN8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.97■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sirpb1bA0A0A6YXN8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sirpb1bA0A0A6YXN8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sirpb1bA0A0A6YXN8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Gm6311-201ENSMUST00000073790 878 ntBASIC19.94■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sirpb1bA0A0A6YXN8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms