Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.18■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.17■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-11A0A0A6YWI9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-11A0A0A6YWI9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ighv1-11A0A0A6YWI9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Gm30023-201ENSMUST00000197970 889 ntBASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-11A0A0A6YWI9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.11■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-11A0A0A6YWI9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-11A0A0A6YWI9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-11A0A0A6YWI9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-11A0A0A6YWI9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-11A0A0A6YWI9 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.08■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.08■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.04■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ighv1-11A0A0A6YWI9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Nkain2-201ENSMUST00000092602 558 ntBASIC16.01■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.01■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-11A0A0A6YWI9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-11A0A0A6YWI9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms