Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Particl-201ENSMUST00000205370 1560 ntBASIC17.28■□□□□ 0.36
Trav16nA0A075B634 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Trav16nA0A075B634 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav16nA0A075B634 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav16nA0A075B634 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav16nA0A075B634 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav16nA0A075B634 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.27■□□□□ 0.36
Trav16nA0A075B634 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav16nA0A075B634 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav16nA0A075B634 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav16nA0A075B634 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.26■□□□□ 0.35
Trav16nA0A075B634 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav16nA0A075B634 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav16nA0A075B634 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav16nA0A075B634 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav16nA0A075B634 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav16nA0A075B634 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav16nA0A075B634 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav16nA0A075B634 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav16nA0A075B634 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav16nA0A075B634 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trav16nA0A075B634 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.24■□□□□ 0.35
Trav16nA0A075B634 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav16nA0A075B634 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav16nA0A075B634 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trav16nA0A075B634 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Trav16nA0A075B634 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16nA0A075B634 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16nA0A075B634 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16nA0A075B634 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav16nA0A075B634 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav16nA0A075B634 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16nA0A075B634 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trav16nA0A075B634 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16nA0A075B634 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16nA0A075B634 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav16nA0A075B634 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16nA0A075B634 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav16nA0A075B634 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16nA0A075B634 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav16nA0A075B634 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16nA0A075B634 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16nA0A075B634 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16nA0A075B634 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16nA0A075B634 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16nA0A075B634 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16nA0A075B634 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav16nA0A075B634 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16nA0A075B634 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16nA0A075B634 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav16nA0A075B634 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.16■□□□□ 0.34
Trav16nA0A075B634 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.16■□□□□ 0.34
Trav16nA0A075B634 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16nA0A075B634 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16nA0A075B634 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav16nA0A075B634 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav16nA0A075B634 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav16nA0A075B634 Gm30023-201ENSMUST00000197970 889 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms