RNA–Protein interactions for RNA: ENST00000565228.1

VPS35-206, Transcript of VPS35, retromer complex component, humanhuman

TSL 3

Gene VPS35, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-206ENST00000565228 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.583e-8■■■■■ 44.1
VPS35-206ENST00000565228 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.62□□□□□ -1.032e-9■■■□□ 17.5
VPS35-206ENST00000565228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.421e-16■■■□□ 15.4
VPS35-206ENST00000565228 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■■□□□ 11.8
Retrieved 4 of 4 RNA–protein pairs in 2.5 ms