RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PRKAA1Q13131 559 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 PEAR1Q5VY43 1037 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 DUS1LQ6P1R4 473 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 AGTRAPQ6RW13 159 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 GOLGA7Q7Z5G4 137 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 CUZD1Q86UP6 607 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 LRRC56Q8IYG6 542 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 ZNF781Q8N8C0 355 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 OR56A3Q8NH54 315 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 MAGEC3Q8TD91 643 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 BCAS4Q8TDM0 211 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 PPP4R1Q8TF05 950 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 RAD51AP1Q96B01 352 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 ELAC2Q9BQ52 826 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 MENTQ9BUN1 341 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 LRRC61Q9BV99 259 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 ILKAPQ9H0C8 392 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 TNFRSF12AQ9NP84 129 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 C11orf16Q9NQ32 467 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 PNPOQ9NVS9 261 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 SPATA7Q9P0W8 599 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 APOBEC3BQ9UH17 382 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 CFAP20Q9Y6A4 193 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 PCDH15Q96QU1 1955 aa14.33□□□□□ -0.12
SHKBP1-211ENST00000595945 PRR5-ARHGAP8B1AHC4 643 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 K7EPI3 171 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 SLC16A8O95907 504 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 F3P13726 295 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 ALOX15P16050 662 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 TSPAN8P19075 237 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 EPORP19235 508 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 GDF5P43026 501 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 BNC1Q01954 994 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 GTF2H2Q13888 395 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 ANGPT1Q15389 498 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 PTCHD3Q3KNS1 767 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 GTF2H2CQ6P1K8 395 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 SLC30A9Q6PML9 568 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 SPATA21Q7Z572 469 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 TEX9Q8N6V9 391 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 PIWIL2Q8TC59 973 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 TRPC4APQ8TEL6 797 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 AGAP11Q8TF27 550 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 ZNF480Q8WV37 535 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 CAMK1GQ96NX5 476 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 ZNF382Q96SR6 550 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 SLC32A1Q9H598 525 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 ERVMER34-1Q9H9K5 563 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 KCNK13Q9HB14 408 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 EML4Q9HC35 981 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 SEMA4BQ9NPR2 832 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 DNAJC28Q9NX36 388 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 TAAR2Q9P1P5 351 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 KLHL14Q9P2G3 628 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 OPTCQ9UBM4 332 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 ZDHHC2Q9UIJ5 367 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 ZNF225Q9UK10 706 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 PILRBQ9UKJ0 227 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 HEBP2Q9Y5Z4 205 aa14.32□□□□□ -0.12
SHKBP1-211ENST00000595945 GPR179Q6PRD1 2367 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 A0A1B0GTL3 188 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 A0A1B0GVT2 93 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 OR52A4PA6NMU1 304 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 NDUFAB1O14561 156 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 OR7A17O14581 309 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 ZNF195O14628 629 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 CCNT2O60583 730 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 MLYCDO95822 493 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 FGF4P08620 206 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 TROVE2P10155 538 aaKnown RBP eCLIP14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 CTSEP14091 401 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 HALP42357 657 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 CTSKP43235 329 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 PIK3CGP48736 1102 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 RPL14P50914 215 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 HK2P52789 917 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 PKNOX1P55347 436 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 SH3BP2P78314 561 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 TRAF3Q13114 568 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 ARHGAP19Q14CB8 494 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 TEAD4Q15561 434 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 CYP2A13Q16696 494 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 IYDQ6PHW0 289 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 MAVSQ7Z434 540 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 RFWD2Q8NHY2 731 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 C10orf82Q8WW14 230 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 FERD3LQ96RJ6 166 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 HGH1Q9BTY7 390 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 SGPP1Q9BX95 441 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 TRIM55Q9BYV6 548 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 SHCBP1LQ9BZQ2 653 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 ATG10Q9H0Y0 220 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 TMEM74BQ9NUR3 256 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 IMP3Q9NV31 184 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 DNAJC11Q9NVH1 559 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 ZNF624Q9P2J8 865 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 SUSD2Q9UGT4 822 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 CIDEBQ9UHD4 219 aa14.31□□□□□ -0.12
SHKBP1-211ENST00000595945 POLG2Q9UHN1 485 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms