RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 INTS10Q9NVR2 710 aaKnown RBP21.57■■□□□ 1.04
GTF2F1-204ENST00000594965 PADI1Q9ULC6 663 aa21.57■■□□□ 1.04
GTF2F1-204ENST00000594965 RUVBL2Q9Y230 463 aaKnown RBP21.57■■□□□ 1.04
GTF2F1-204ENST00000594965 MAD1L1Q9Y6D9 718 aa21.57■■□□□ 1.04
GTF2F1-204ENST00000594965 H3BMM5 538 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 PFDN6O15212 129 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 HCRTR1O43613 425 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 BANF1O75531 89 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 CCNYL3P0C7X3 344 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 PKMP14618 531 aaKnown RBP21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 GABRA4P48169 554 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 CCSMST1Q4G0I0 132 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 IZUMO3Q5VZ72 239 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 HOOK3Q86VS8 718 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 TMEM126BQ8IUX1 230 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 SPNS2Q8IVW8 549 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 CT55Q8WUE5 264 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 MED8Q96G25 268 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 IL17FQ96PD4 163 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 SYTL2Q9HCH5 934 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 FBXO6Q9NRD1 293 aaPredicted RBP21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 MED16Q9Y2X0 877 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 FAM169AQ9Y6X4 670 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 ATRXP46100 2492 aa21.56■■□□□ 1.04
GTF2F1-204ENST00000594965 CTAGE9A4FU28 777 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 TMEM150CB9EJG8 249 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 KDM1AO60341 852 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 CPNE3O75131 537 aaKnown RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 C1orf105O95561 183 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 RPN2P04844 631 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 CD9P21926 228 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 OAS2P29728 719 aaKnown RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 SLC1A2P43004 574 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 BDKRB1P46663 353 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 DHX9Q08211 1270 aaKnown RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 CDC20Q12834 499 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 GPS2Q13227 327 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 THOC5Q13769 683 aaKnown RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 COL9A2Q14055 689 aaPredicted RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 KIR2DS3Q14952 304 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 LONRF1Q17RB8 773 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 SLC5A12Q1EHB4 618 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 ZNF549Q6P9A3 640 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 FAM199XQ6PEV8 388 aaPredicted RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 ZNF517Q6ZMY9 492 aaPredicted RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 PCGF5Q86SE9 256 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 FAM20CQ8IXL6 584 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 C19orf47Q8N9M1 422 aaKnown RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 RUFY1Q96T51 708 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 SLC30A3Q99726 388 aa21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 C20orf96Q9NUD7 363 aaPredicted RBP21.55■■□□□ 1.04
GTF2F1-204ENST00000594965 A0A0J9YY10 115 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 KRT87PA6NCN2 255 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 ISM1B1AKI9 464 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 RASGRF2O14827 1237 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 MATN4O95460 622 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 PRKAR1AP10644 381 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 TCN2P20062 427 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 CHRM3P20309 590 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 CLCN7P51798 805 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 DR1Q01658 176 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 DNASE1L3Q13609 305 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 CRTC2Q53ET0 693 aaPredicted RBP21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 ACSBG2Q5FVE4 666 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 ATP1A1-AS1Q5TC04 95 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 IGDCC3Q8IVU1 814 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 C2orf73Q8N5S3 287 aaPredicted RBP21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 OR2L8Q8NGY9 312 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 TRIM51Q9BSJ1 452 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 CHRNA10Q9GZZ6 450 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 FANCEQ9HB96 536 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 TSR3Q9UJK0 312 aaKnown RBP21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 VPS9D1Q9Y2B5 631 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 PCDHB3Q9Y5E6 796 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 PCDHGA6Q9Y5G7 932 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 CCDC88CQ9P219 2028 aa21.54■■□□□ 1.04
GTF2F1-204ENST00000594965 H3BMH7 237 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 CCDC188H7C350 402 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 PRICKLE3O43900 615 aaPredicted RBP21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 FAM87AP0C7U9 286 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 PGAM1P18669 254 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 ATP5DP30049 168 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 MPP1Q00013 466 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 C19orf57Q0VDD7 668 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 CRYMQ14894 314 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 LCN10Q6JVE6 187 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 CNSTQ6PJW8 725 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 SYDE1Q6ZW31 735 aaPredicted RBP21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 TAX1BP1Q86VP1 789 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 LMNTD2Q8IXW0 634 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 C17orf53Q8N3J3 647 aaPredicted RBP21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 ZBTB2Q8N680 514 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 GIMAP7Q8NHV1 300 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 GSDMBQ8TAX9 411 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 RAD51AP1Q96B01 352 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 TCTN2Q96GX1 697 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 PWWP2AQ96N64 755 aa21.53■■□□□ 1.04
GTF2F1-204ENST00000594965 LRFN5Q96NI6 719 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms