RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ANXA3P12429 323 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 ANXA8P13928 327 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 CRATP43155 626 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 ALDH3B2P48448 385 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 CYP24A1Q07973 514 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 CCNJQ5T5M9 372 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 C1orf185Q5T7R7 199 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 BCL2L15Q5TBC7 163 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 ANXA8L1Q5VT79 327 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 C1orf189Q5VU69 101 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 CMC1Q7Z7K0 106 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 GDPD1Q8N9F7 314 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 TMEM185AQ8NFB2 350 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 ZFAND1Q8TCF1 268 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 COL26A1Q96A83 441 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 CENPNQ96H22 339 aaPredicted RBP8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 CRAMP1Q96RY5 1269 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 ARL6Q9H0F7 186 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 GTF2A1LQ9UNN4 478 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 BTRCQ9Y297 605 aa8.84□□□□□ -0.99
GTF2A1-203ENST00000553612 AGAP5A6NIR3 686 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 WDPCPO95876 746 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 SNTB1Q13884 538 aaKnown RBP8.84□□□□□ -1
GTF2A1-203ENST00000553612 TIMM50Q3ZCQ8 353 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 MTFR2Q6P444 385 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 ZNF605Q86T29 641 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 FAM217AQ8IXS0 508 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 PGAM4Q8N0Y7 254 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 ZNF383Q8NA42 475 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 ZNF671Q8TAW3 534 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 SPATA20Q8TB22 786 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 ST7LQ8TDW4 575 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 TRIM54Q9BYV2 358 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 RPS10P5Q9NQ39 176 aa8.84□□□□□ -1
GTF2A1-203ENST00000553612 MYH6P13533 1939 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 GSAPA4D1B5 854 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 LCHNA4D1U4 455 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 LACTBL1A8MY62 500 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 CBX4O00257 560 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 PCDHGA12O60330 932 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 JCHAINP01591 159 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 OR1G1P47890 313 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 NAGLUP54802 743 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 PTK6Q13882 451 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 NFATC4Q14934 902 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 USP30Q70CQ3 517 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 UBQLNLQ8IYU4 475 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 CNIH3Q8TBE1 160 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 STK35Q8TDR2 534 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 FSD1LQ9BXM9 530 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 RBM38Q9H0Z9 239 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 CDV3Q9UKY7 258 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 SLC35F4A4IF30 521 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 ALPLP05186 524 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 KLK3P07288 261 aaPredicted RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 ZNF280AP59817 542 aaPredicted RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 CRYZQ08257 329 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 ORC2Q13416 577 aaPredicted RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 CDH18Q13634 790 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 TATDN3Q17R31 274 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 IQCCQ4KMZ1 466 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 ARHGAP15Q53QZ3 475 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 LRFN4Q6PJG9 635 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 SSX7Q7RTT5 188 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 SLC38A4Q969I6 547 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 THOC3Q96J01 351 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 LGALS13Q9UHV8 139 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 EIF2AK4Q9P2K8 1649 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 A0A087X0M5 115 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 A0A1B0GX30 115 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 K7EPK0 472 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 SH3BGRLO75368 114 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 DRG2P55039 364 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.83□□□□□ -1
GTF2A1-203ENST00000553612 SLAMF1Q13291 335 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 SLC9B1Q4ZJI4 515 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 MFSD7Q6UXD7 560 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 DCP1BQ8IZD4 617 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 FAM71E2Q8N5Q1 922 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 MFSD2AQ8NA29 543 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 RHOXF1Q8NHV9 184 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 ZCCHC10Q8TBK6 192 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 NYXQ9GZU5 481 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 UPB1Q9UBR1 384 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 ZNF69Q9UC07 566 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 TJP2Q9UDY2 1190 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 ZNRF3Q9ULT6 936 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 MYOM2P54296 1465 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 CXorf65A6NEN9 183 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 OR5K4A6NMS3 321 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 PRMT5O14744 637 aaPredicted RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 SLC31A2O15432 143 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 SLC37A4O43826 429 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 AHSA1O95433 338 aa8.83□□□□□ -1
GTF2A1-203ENST00000553612 RBM34P42696 430 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 MAT1AQ00266 395 aaKnown RBP8.83□□□□□ -1
GTF2A1-203ENST00000553612 GINS1Q14691 196 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms