RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 A0A1W2PQ72 361 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 H0YAE9 185 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 H3BQ06 376 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 GAPDHSO14556 408 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 LDLRAD4O15165 306 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 CEACAM4O75871 244 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 PARNO95453 639 aaKnown RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 BCL10O95999 233 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 PRKAR1AP10644 381 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 TNFAIP3P21580 790 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SLC6A6P31641 620 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 GGT5P36269 586 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 PAFAH1B1P43034 410 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 MSH2P43246 934 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 RGRP47804 291 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 KHKP50053 298 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 XGP55808 180 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 EIF3BP55884 814 aaKnown RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 CX3CL1P78423 397 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 TFAP4Q01664 338 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 DMPKQ09013 629 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 ZNF177Q13360 481 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 FRG1Q14331 258 aaKnown RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 DLG2Q15700 870 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 GPR68Q15743 365 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 FAM189A2Q15884 450 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 PDCD2Q16342 344 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 CCNG2Q16589 344 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 Q1RN00 199 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 ITPRIPL2Q3MIP1 535 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 DPCR1Q3MIW9 517 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SOWAHCQ53LP3 525 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 SLC25A53Q5H9E4 307 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SPECC1Q5M775 1068 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 UTF1Q5T230 341 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 CDC73Q6P1J9 531 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 TIFABQ6ZNK6 161 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SEPT14Q6ZU15 432 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 CATSPERDQ86XM0 798 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 RNF130Q86XS8 419 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 GALNT13Q8IUC8 556 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 TMEM139Q8IV31 216 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 ARHGAP12Q8IWW6 846 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 C4orf32Q8N8J7 132 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 OR13C3Q8NGS6 347 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 TBC1D16Q8TBP0 767 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 GATAD1Q8WUU5 269 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 APOBEC4Q8WW27 367 aaKnown RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 IRGQQ8WZA9 623 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SMARCE1Q969G3 411 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 CNRIP1Q96F85 164 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 ZNF799Q96GE5 643 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 RADILQ96JH8 1075 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 UBXN10Q96LJ8 280 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 FAM81BQ96LP2 452 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SPAG5Q96R06 1193 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SLC22A12Q96S37 553 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 MAP3K3Q99759 626 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 OVOL2Q9BRP0 275 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 URM1Q9BTM9 101 aaKnown RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 PCGF6Q9BYE7 350 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 OR2B2Q9GZK3 357 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 S1PR5Q9H228 398 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 JPT2Q9H910 190 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 HHATLQ9HCP6 504 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 KCNMB3Q9NPA1 279 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 RIC8AQ9NPQ8 531 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 CYTL1Q9NRR1 136 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SMC4Q9NTJ3 1288 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 ZNF701Q9NV72 531 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 P4HTMQ9NXG6 502 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 WSB2Q9NYS7 404 aaPredicted RBP0.54□□□□□ -2.32
COPB1-212ENST00000534771 ABI3Q9P2A4 366 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 CACNG4Q9UBN1 327 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 SARDHQ9UL12 918 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 PNMA2Q9UL42 364 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 MKLN1Q9UL63 735 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 FBN3Q75N90 2809 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 HIVEP2P31629 2446 aa0.54□□□□□ -2.32
COPB1-212ENST00000534771 PRSS51A0A1B0GVH4 220 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 TMEM8BA6NDV4 472 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 E7ENQ6 273 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 E9PAM4 449 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 K7ENM7 598 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 NDUFS4O43181 175 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 PAGE4O60829 102 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 NDUFS3O75489 264 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 TRUB2O95900 331 aaKnown RBP0.53□□□□□ -2.32
COPB1-212ENST00000534771 GH2P01242 217 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 FAM200BP0CF97 657 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 ANPEPP15144 967 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 RPL34P49207 117 aaKnown RBP0.53□□□□□ -2.32
COPB1-212ENST00000534771 CCR5P51681 352 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 PRELPP51888 382 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 PDX1P52945 283 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 F2RL1P55085 397 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 PPP2R2BQ00005 443 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 DHODHQ02127 395 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 TEFQ10587 303 aa0.53□□□□□ -2.32
COPB1-212ENST00000534771 PTP4A2Q12974 167 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 1181.2 ms