RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 RPN2P04844 631 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 CHRM5P08912 532 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-224ENST00000523873 CBSLP0DN79 551 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 ENO3P13929 434 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-224ENST00000523873 CD9P21926 228 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 CBSP35520 551 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 SKIV2L2P42285 1042 aaKnown RBP12.42□□□□□ -0.42
VEGFA-224ENST00000523873 RAB28P51157 221 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 PMS2P54278 862 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 VSNL1P62760 191 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 SH3BP2P78314 561 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 PRKAA1Q13131 559 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.422e-8■□□□□ 9.9
VEGFA-224ENST00000523873 FASTKQ14296 549 aaKnown RBP12.42□□□□□ -0.42
VEGFA-224ENST00000523873 USP10Q14694 798 aaKnown RBP12.42□□□□□ -0.42
VEGFA-224ENST00000523873 SLMAPQ14BN4 828 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 RTP5Q14D33 572 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 GRTP1Q5TC63 336 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 UBE2R2Q712K3 238 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-224ENST00000523873 FAM129CQ86XR2 697 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 MYO1HQ8N1T3 1032 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 LINC01555Q8NAE3 123 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 ANKRD49Q8WVL7 239 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 ASB11Q8WXH4 323 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 DLG3Q92796 817 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 RAD51AP1Q96B01 352 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 ZDHHC12Q96GR4 267 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 PKP4Q99569 1192 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 GPR22Q99680 433 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 CMKLR1Q99788 373 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 FUT8Q9BYC5 575 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 POLR1BQ9H9Y6 1135 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 EPHA6Q9UF33 1036 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 POMT2Q9UKY4 750 aa12.42□□□□□ -0.42
VEGFA-224ENST00000523873 NPEPPSL1A6NEC2 478 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 ISM1B1AKI9 464 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 POC1B-GALNT4F8VUJ3 575 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 HGSO14964 777 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 RIPK2O43353 540 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 PRAMEF10O60809 474 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 CATP04040 527 aaKnown RBP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 ITGA2BP08514 1039 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 JMJD7P0C870 316 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 FGF3P11487 239 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 UGT2B7P16662 529 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 ZNF37AP17032 561 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 CDH3P22223 829 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 TNFRSF8P28908 595 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 PRDX3P30048 256 aaKnown RBP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 CSTF2P33240 577 aaKnown RBP eCLIP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 SPRP35270 261 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 RGS4P49798 205 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 SLC12A2P55011 1212 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 IL2P60568 153 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 NAB1Q13506 487 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 KCNAB1Q14722 419 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 PHKG1Q16816 387 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 ERCC6LQ2NKX8 1250 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 TTC23LQ6PF05 361 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 MBOAT1Q6ZNC8 495 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 PRSS42Q7Z5A4 293 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 CMC1Q7Z7K0 106 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 RASGRP3Q8IV61 690 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 SPATA6LQ8N4H0 392 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 PPFIBP2Q8ND30 876 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 AGBL5Q8NDL9 886 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 OR9A1PQ8NGU1 263 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 OR2L8Q8NGY9 312 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 FLVCR1-AS1Q8TAF5 88 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 USP7Q93009 1102 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 GRAMD1AQ96CP6 724 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 OR2A14Q96R47 310 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 CYTH2Q99418 400 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 CTRCQ99895 268 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 EPB41L4BQ9H329 900 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 ZNF768Q9H5H4 540 aaKnown RBP12.41□□□□□ -0.42
VEGFA-224ENST00000523873 APMAPQ9HDC9 416 aa12.41□□□□□ -0.42
VEGFA-224ENST00000523873 CCDC88CQ9P219 2028 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 A0A087WUV0 522 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 HMX2A2RU54 273 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 TLCD2A6NGC4 264 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 SLC9B1P1A6NJY1 282 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 C2orf74A8MZ97 194 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 GFYI3L273 518 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 MYO1CO00159 1063 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 EIF3FO00303 357 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 WISP3O95389 354 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 ANKRD34CP0C6C1 535 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 ST6GAL1P15907 406 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 PSMB5P28074 263 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 CCNFP41002 786 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 POU4F1Q01851 419 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 TSTA3Q13630 321 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 MROH9Q5TGP6 573 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 TRMT10CQ7L0Y3 403 aaKnown RBP12.4□□□□□ -0.42
VEGFA-224ENST00000523873 BMPERQ8N8U9 685 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
VEGFA-224ENST00000523873 KLHL6Q8WZ60 621 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms