RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	CPA4	Q9UI42	421 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	VPS28	Q9UK41	221 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	DERA	Q9Y315	318 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	RPL36	Q9Y3U8	105 aa	Known RBP	6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	MAGED1	Q9Y5V3	778 aa	Predicted RBP	6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	SCN9A	Q15858	1988 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	MYBPHL	A2RUH7	354 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	RIIAD1	A6NNX1	92 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TNFRSF11B	O00300	401 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	DNAJB5	O75953	348 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	IFNW1	P05000	195 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	EPOR	P19235	508 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	EDNRB	P24530	442 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	AXL	P30530	894 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	OR3A3	P47888	321 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	OR3A2	P47893	321 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TTPA	P49638	278 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	MPP1	Q00013	466 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ZNF45	Q02386	682 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ADAM15	Q13444	863 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	NADK2	Q4G0N4	442 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	GPAT3	Q53EU6	434 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	COLEC12	Q5KU26	742 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	OGFOD2	Q6N063	350 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	CTU1	Q7Z7A3	348 aa	Known RBP	6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	FAM35A	Q86V20	835 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	SLC22A16	Q86VW1	577 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TP53INP2	Q8IXH6	220 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	PGBD3	Q8N328	593 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	NRG4	Q8WWG1	115 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ARL5B	Q96KC2	179 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	DNAJC1	Q96KC8	554 aa	Known RBP	6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ZFP3	Q96NJ6	502 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	CNPPD1	Q9BV87	410 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	CCDC106	Q9BWC9	280 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	VRTN	Q9H8Y1	702 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	IKZF2	Q9UKS7	526 aa		6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	6	□□□□□ -1.45
HNRNPU-208	ENST00000475997	AQP12B	A6NM10	295 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ANXA2P2	A6NMY6	339 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997		H3BNH8	94 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	FZD9	O00144	591 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ANXA2	P07355	339 aa	Known RBP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	PET100	P0DJ07	73 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	PSEN2	P49810	448 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	CPT1A	P50416	773 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TAS2R41	P59536	307 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	MAX	P61244	160 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	EFEMP1	Q12805	493 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	BOP1	Q14137	746 aa	Known RBP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	CTC1	Q2NKJ3	1217 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	NOL9	Q5SY16	702 aa	Known RBP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	CXorf57	Q6NSI4	855 aa	Known RBP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TIFAB	Q6ZNK6	161 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	USP45	Q70EL2	814 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	GLT6D1	Q7Z4J2	308 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	AMIGO1	Q86WK6	493 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	AQP12A	Q8IXF9	295 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	CRYBG2	Q8N1P7	616 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	DNAJB8	Q8NHS0	232 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	VANGL1	Q8TAA9	524 aa	Predicted RBP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	HEXDC	Q8WVB3	486 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	SERPINB11	Q96P15	392 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	FCRL4	Q96PJ5	515 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	HNRNPAB	Q99729	332 aa	Known RBP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	FUZ	Q9BT04	418 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ZYG11B	Q9C0D3	744 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	SNTG1	Q9NSN8	517 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TLL2	Q9Y6L7	1015 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	SRCAP	Q6ZRS2	3230 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	NEMP2	A6NFY4	417 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997		A6NHS1	94 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997		H0Y858	1186 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TREH	O43280	583 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	FGB	P02675	491 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	UROS	P10746	265 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	HSD3B1	P14060	373 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	NCK1	P16333	377 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	RPS3	P23396	243 aa	Known RBP eCLIP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ZNF81	P51508	661 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	SLC10A7	Q0GE19	358 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ZNF404	Q494X3	552 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	DUSP28	Q4G0W2	176 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	BRMS1L	Q5PSV4	323 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	GK5	Q6ZS86	529 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	LINGO2	Q7L985	606 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	PAQR7	Q86WK9	346 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	TMC8	Q8IU68	726 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	POC1B	Q8TC44	478 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	FBXO32	Q969P5	355 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	ZSWIM3	Q96MP5	696 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	PARK7	Q99497	189 aa	Known RBP	5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	SLC39A3	Q9BRY0	314 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	C20orf27	Q9GZN8	174 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	COMMD4	Q9H0A8	199 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	R3HDML	Q9H3Y0	253 aa		5.99	□□□□□ -1.45
HNRNPU-208	ENST00000475997	BIN3	Q9NQY0	253 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms