RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SNX19Q92543 992 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 MAGEB10Q96LZ2 347 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 ZNF382Q96SR6 550 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 EGFL8Q99944 293 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 PLCD4Q9BRC7 762 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 TMEM79Q9BSE2 394 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 HGH1Q9BTY7 390 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 MENTQ9BUN1 341 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 WWP1Q9H0M0 922 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 STN1Q9H668 368 aaKnown RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 ZNF395Q9H8N7 513 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 ZBTB26Q9HCK0 441 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 KCNK4Q9NYG8 393 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 SPATA7Q9P0W8 599 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 STOX2Q9P2F5 926 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 KLF15Q9UIH9 416 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 MOSPD1Q9UJG1 213 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 PILRBQ9UKJ0 227 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 ASF1AQ9Y294 204 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 DNAJC16Q9Y2G8 782 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 COLEC10Q9Y6Z7 277 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 KIR2DS5A0A0G2JLQ3 304 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 A0A0G2JNG1 304 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 E7ENX8 843 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 KIR2DS3K7RE56 304 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 MATN2O00339 956 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 UBFD1O14562 309 aaKnown RBP12.39□□□□□ -0.43
TRAF4-208ENST00000469529 KDM1AO60341 852 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 KATNA1O75449 491 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 GUCA1CO95843 209 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 SLC16A8O95907 504 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 F3P13726 295 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 SLC2A4P14672 509 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 EPB42P16452 691 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 CCND1P24385 295 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 HALP42357 657 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 CASP2P42575 452 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 RXRGP48443 463 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 AGTR2P50052 363 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 HNRNPKP61978 463 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAF4-208ENST00000469529 TAP2Q03519 686 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 GTF2H2Q13888 395 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 KIR2DS5Q14953 304 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 ELOCQ15369 112 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 PTCHD3Q3KNS1 767 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 PLA2G4EQ3MJ16 856 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 UGT3A2Q3SY77 523 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 GTF2H2CQ6P1K8 395 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 AGTRAPQ6RW13 159 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 SPATA21Q7Z572 469 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 RABEPKQ7Z6M1 372 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 DEFB119Q8N690 84 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 AVL9Q8NBF6 648 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 CFAP61Q8NHU2 1237 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 ZNF473Q8WTR7 871 aaKnown RBP12.39□□□□□ -0.43
TRAF4-208ENST00000469529 ZNF480Q8WV37 535 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 CCT7Q99832 543 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 SGPP1Q9BX95 441 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 RAB11FIP5Q9BXF6 653 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 KIR3DX1Q9H7L2 352 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 KCNK13Q9HB14 408 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 PRDM8Q9NQV8 689 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 GPRC5BQ9NZH0 403 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 OPTCQ9UBM4 332 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 TBC1D29Q9UFV1 150 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 ZDHHC2Q9UIJ5 367 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 KCNK6Q9Y257 313 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 CSNK1G3Q9Y6M4 447 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 PTPRZ1P23471 2315 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-208ENST00000469529 PIKFYVEQ9Y2I7 2098 aa12.39□□□□□ -0.43
TRAF4-208ENST00000469529 NCF1BA6NI72 391 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 NCF1CA8MVU1 366 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 HDAC3O15379 428 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 DFNA5O60443 496 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 UGDHO60701 494 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 LYPLA1O75608 230 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 OTCP00480 354 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 CHRNGP07510 517 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 NCF1P14598 390 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 JUNDP17535 347 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 RPL10P27635 214 aaKnown RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 IMPA1P29218 277 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 ACTR1BP42025 376 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 CTSKP43235 329 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 CDH13P55290 713 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 ACTR1AP61163 376 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 SH3BP2P78314 561 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 ZNF33BQ06732 778 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 SIM2Q14190 667 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 CCSMST1Q4G0I0 132 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 OGFOD3Q6PK18 319 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 RD3Q7Z3Z2 195 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 CUZD1Q86UP6 607 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 C17orf82Q86X59 251 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 SYT12Q8IV01 421 aa12.38□□□□□ -0.43
TRAF4-208ENST00000469529 RBM12BQ8IXT5 1001 aaKnown RBP12.38□□□□□ -0.43
TRAF4-208ENST00000469529 ZNF781Q8N8C0 355 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms