RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 GZMMP51124 257 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 SGSHP51688 502 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 NKX2-5P52952 324 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 YBEYP58557 167 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 RPS24P62847 133 aaKnown RBP11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 PHKG1Q16816 387 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 LRRC8DQ7L1W4 858 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 ZDHHC21Q8IVQ6 265 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 RGL4Q8IZJ4 473 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 Q8N9G6 341 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 KCNJ9Q92806 393 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 SLX1AQ9BQ83 275 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 BOCQ9BWV1 1114 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 CLMPQ9H6B4 373 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 ZBTB20Q9HC78 741 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 MAGEE1Q9HCI5 957 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 EIF3LQ9Y262 564 aaKnown RBP11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 PCDHGB1Q9Y5G3 927 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 ORC6Q9Y5N6 252 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 RAI2Q9Y5P3 530 aa11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 ZFP37Q9Y6Q3 630 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-203ENST00000462146 IFRD1O00458 451 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 ITGAMP11215 1152 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 GSSP48637 474 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 ACOX1Q15067 660 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 UTS2BQ765I0 119 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 CCDC71Q8IV32 467 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 STARD8Q92502 1023 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 EID2BQ96D98 161 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 FAM120BQ96EK7 910 aaKnown RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 PPP3R2Q96LZ3 170 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 CRISPLD1Q9H336 500 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 FBXO44Q9H4M3 255 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 DUSP21Q9H596 190 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 NECTIN3Q9NQS3 549 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 TMEM45AQ9NWC5 275 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 UBA2Q9UBT2 640 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 ZNF490Q9ULM2 529 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 PRG3Q9Y2Y8 225 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 SCN10AQ9Y5Y9 1956 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 STX7O15400 261 aaKnown RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 OTCP00480 354 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 ALOX5P09917 674 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 CR2P20023 1033 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 TGFBR2P37173 567 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 THPOP40225 353 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 MAPKAPK2P49137 400 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 SEPHS1P49903 392 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 FCGRTP55899 365 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 MGAT3Q09327 533 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 SYT16Q17RD7 645 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 FAM110CQ1W6H9 321 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 CCDC92Q53HC0 331 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 SYT6Q5T7P8 510 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 SPRYD7Q5W111 196 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 LINGO4Q6UY18 593 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 PLPP6Q8IY26 295 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 PYURFQ96I23 114 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 CPPED1Q9BRF8 314 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 ASPSCR1Q9BZE9 553 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 TNKS2Q9H2K2 1166 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 DSN1Q9H410 356 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 ACOT13Q9NPJ3 140 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 SERHLQ9NQF3 203 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 C1orf109Q9NX04 203 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 ANKMY1Q9P2S6 941 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 DLGAP4Q9Y2H0 992 aa11.47□□□□□ -0.57
PDZRN3-203ENST00000462146 MOXD2PA6NHM9 499 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 M0QX08 132 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 PER2O15055 1255 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 IGLV3-27P01718 113 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 RETP07949 1114 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 TYMPP19971 482 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 HOXA9P31269 272 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 KRT20P35900 424 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 ILF2Q12905 390 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 SHQ1Q6PI26 577 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 VTCN1Q7Z7D3 282 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 CALHM3Q86XJ0 350 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 HIPK1Q86Z02 1210 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 SCAIQ8N9R8 606 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 LGALS12Q96DT0 336 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 EGFL8Q99944 293 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 P2RY12Q9H244 342 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 GPRC5BQ9NZH0 403 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 AGO1Q9UL18 857 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 GMPPBQ9Y5P6 360 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 PRSS21Q9Y6M0 314 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 A0A0U1RQF3 1178 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 FAM220BPB1ANY3 271 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 ANKRD66B4E2M5 251 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 F5H5T6 163 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 RGS14O43566 566 aa11.46□□□□□ -0.57
PDZRN3-203ENST00000462146 FAM20BO75063 409 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms