RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CBSP35520 551 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 GABRA4P48169 554 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 ATP1A4Q13733 1029 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 SEMA3AQ14563 771 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 NADK2Q4G0N4 442 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 C1orf189Q5VU69 101 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 RHBDD2Q6NTF9 364 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 FAM26EQ8N5C1 309 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 PEX13Q92968 403 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 SGSM3Q96HU1 749 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 AP1M1Q9BXS5 423 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 TXLNGQ9NUQ3 528 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 VPS4AQ9UN37 437 aa20.29■□□□□ 0.84
VSX1-206ENST00000444511 NBASA2RRP1 2371 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 CLEC18AA5D8T8 446 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 A6NL46 340 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 ZSCAN9O15535 394 aaPredicted RBP20.28■□□□□ 0.84
VSX1-206ENST00000444511 APOA4P06727 396 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 PKLRP30613 574 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 OTX2P32243 289 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 RAB28P51157 221 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 DCDP81605 110 aaKnown RBP20.28■□□□□ 0.84
VSX1-206ENST00000444511 SRSF1Q07955 248 aaKnown RBP eCLIP20.28■□□□□ 0.84
VSX1-206ENST00000444511 RPS6KA1Q15418 735 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 CLEC18BQ6UXF7 455 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 ZNF655Q8N720 491 aaPredicted RBP20.28■□□□□ 0.84
VSX1-206ENST00000444511 GLIS1Q8NBF1 620 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 CLEC18CQ8NCF0 446 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 FDCSPQ8NFU4 85 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 CFAP61Q8NHU2 1237 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 CPT1CQ8TCG5 803 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 PROKR1Q8TCW9 393 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 CARD6Q9BX69 1037 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 CATSPERZQ9NTU4 200 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 GPR83Q9NYM4 423 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 IFT80Q9P2H3 777 aaPredicted RBP20.28■□□□□ 0.84
VSX1-206ENST00000444511 SRPK3Q9UPE1 567 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 PLCL2Q9UPR0 1127 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 PTPN13Q12923 2485 aa20.28■□□□□ 0.84
VSX1-206ENST00000444511 FLNCQ14315 2725 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 PIKFYVEQ9Y2I7 2098 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 IQCF5A8MTL0 148 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 H3BMH7 237 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 DPM1O60762 260 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 CD63P08962 238 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 PEBP1P30086 187 aaKnown RBP20.27■□□□□ 0.84
VSX1-206ENST00000444511 FOLR3P41439 243 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 TMED2Q15363 201 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 PCID2Q5JVF3 399 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 TLDC1Q6P9B6 456 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 LDB1Q86U70 411 aaPredicted RBP20.27■□□□□ 0.84
VSX1-206ENST00000444511 VRK3Q8IV63 474 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 DNAJC22Q8N4W6 341 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 LKAAEAR1Q8TD35 194 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 IP6K3Q96PC2 410 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 GBP5Q96PP8 586 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 NDC1Q9BTX1 674 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 NUDT9Q9BW91 350 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 CHRAC1Q9NRG0 131 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 DHCR7Q9UBM7 475 aaKnown RBP20.27■□□□□ 0.84
VSX1-206ENST00000444511 NDOR1Q9UHB4 597 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 CDYLQ9Y232 598 aa20.27■□□□□ 0.84
VSX1-206ENST00000444511 PTRH2Q9Y3E5 179 aaKnown RBP20.27■□□□□ 0.84
VSX1-206ENST00000444511 RELNP78509 3460 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 SPTBP11277 2137 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 PRMT5O14744 637 aaPredicted RBP20.26■□□□□ 0.83
VSX1-206ENST00000444511 GPC4O75487 556 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 KLF7O75840 302 aaPredicted RBP20.26■□□□□ 0.83
VSX1-206ENST00000444511 CTSBP07858 339 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 ZSCAN5DPP0CG00 497 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 RPL22P35268 128 aaKnown RBP20.26■□□□□ 0.83
VSX1-206ENST00000444511 TTPAP49638 278 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 SESN2P58004 480 aaPredicted RBP20.26■□□□□ 0.83
VSX1-206ENST00000444511 SSPNQ14714 243 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 KYNUQ16719 465 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 MEI1Q5TIA1 1274 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 PTRHD1Q6GMV3 140 aaKnown RBP20.26■□□□□ 0.83
VSX1-206ENST00000444511 UNC5DQ6UXZ4 953 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 MRGPREQ86SM8 312 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 HPS6Q86YV9 775 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 DCUN1D3Q8IWE4 304 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 FAM20CQ8IXL6 584 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 KRT222Q8N1A0 295 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 GSDMBQ8TAX9 411 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 SLC22A18Q96BI1 424 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 EIF2B3Q9NR50 452 aaKnown RBP20.26■□□□□ 0.83
VSX1-206ENST00000444511 MARCH4Q9P2E8 410 aaPredicted RBP20.26■□□□□ 0.83
VSX1-206ENST00000444511 CIDEBQ9UHD4 219 aa20.26■□□□□ 0.83
VSX1-206ENST00000444511 PEX12O00623 359 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 CD3EAPO15446 510 aaKnown RBP20.25■□□□□ 0.83
VSX1-206ENST00000444511 MAGP20916 626 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 CD9P21926 228 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 AOAHP28039 575 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 SLC9A5Q14940 896 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 CCNG2Q16589 344 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 C2orf73Q8N5S3 287 aaPredicted RBP20.25■□□□□ 0.83
VSX1-206ENST00000444511 LINC01555Q8NAE3 123 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 GALNT11Q8NCW6 608 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 MFRPQ9BY79 579 aa20.25■□□□□ 0.83
VSX1-206ENST00000444511 EURLQ9NYK6 297 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms