RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GBX1Q14549 363 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 NEK5Q6P3R8 708 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 NECAB2Q7Z6G3 386 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 LIX1Q8N485 282 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 ITFG1Q8TB96 612 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 TSPEARQ8WU66 669 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 ZUFSPQ96AP4 578 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC2A11Q9BYW1 496 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 ACPTQ9BZG2 426 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 IKZF5Q9H5V7 419 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 RDH14Q9HBH5 336 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 ARMC1Q9NVT9 282 aa14.83□□□□□ -0.04
SCAMP4-202ENST00000409472 CARNS1A5YM72 827 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ANTXRLA6NF34 631 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 BNIP2Q12982 314 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 TMEM240Q5SV17 173 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 CHERPQ8IWX8 916 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC22A15Q8IZD6 547 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ARL10Q8N8L6 244 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ARMC5Q96C12 935 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ZNF597Q96LX8 424 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 CCT7Q99832 543 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 RIOK2Q9BVS4 552 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 VAPAQ9P0L0 249 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 WASH3PC4AMC7 463 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 DFNA5O60443 496 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 OR56A5P0C7T3 313 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ATP1B2P14415 290 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 TIMP2P16035 220 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ITPKAP23677 461 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 PRKCQQ04759 706 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 GRIN2CQ14957 1233 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 CYP51A1Q16850 503 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 FAM174BQ3ZCQ3 159 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 GTDC1Q4AE62 458 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 SPANXN4Q5MJ08 99 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 IYDQ6PHW0 289 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 RBM23Q86U06 439 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 SFTPA1Q8IWL2 248 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 SP7Q8TDD2 431 aaPredicted RBP14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ULK4Q96C45 1275 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 VPS50Q96JG6 964 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ZFYVE19Q96K21 471 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 NTMT1Q9BV86 223 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 MRPS26Q9BYN8 205 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 ATG10Q9H0Y0 220 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 SLC6A13Q9NSD5 602 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 DUS2Q9NX74 493 aaKnown RBP14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 WBP1LQ9NX94 342 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 DLGAP4Q9Y2H0 992 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 LRRK1Q38SD2 2015 aa14.82□□□□□ -0.04
SCAMP4-202ENST00000409472 AQP12BA6NM10 295 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 AREL1O15033 823 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 ULK1O75385 1050 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 PDYNP01213 254 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 ANXA5P08758 320 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 PFKLP17858 780 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 POLR2EP19388 210 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 JAK1P23458 1154 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 PTCHD3Q3KNS1 767 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 ARHGAP15Q53QZ3 475 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 Q6ZNX1 250 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 AQP12AQ8IXF9 295 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 DPP10Q8N608 796 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 C12orf76Q8N812 135 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 ASB11Q8WXH4 323 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 RAD9AQ99638 391 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 HEPHQ9BQS7 1158 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 ACTR8Q9H981 624 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 AGPAT4Q9NRZ5 378 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 TRPS1Q9UHF7 1281 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 FADS3Q9Y5Q0 445 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 EYSQ5T1H1 3165 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 LINC01553A4QN01 128 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 NUAK1O60285 661 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 SEC22BO75396 215 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 TRMUO75648 421 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 WDR47O94967 919 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 CYP17A1P05093 508 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 EBLN1P0CF75 366 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 SYN1P17600 705 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 RPL10P27635 214 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 VIPR1P32241 457 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 VIPR2P41587 438 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 RECQLP46063 649 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 CTSCP53634 463 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 PTPN5P54829 565 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 CCSMST1Q4G0I0 132 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 BORAQ6PGQ7 559 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 KIAA0907Q7Z7F0 614 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 PTRH1Q86Y79 214 aaKnown RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 MSRB3Q8IXL7 192 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 AHI1Q8N157 1196 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 CBR4Q8N4T8 237 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 ELMO1Q92556 727 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 USP7Q93009 1102 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 ZNF707Q96C28 371 aaPredicted RBP14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 HSPBAP1Q96EW2 488 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 PPP3R2Q96LZ3 170 aa14.81□□□□□ -0.04
SCAMP4-202ENST00000409472 RBM38Q9H0Z9 239 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms