RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NDRG4Q9ULP0 352 aaKnown RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 ALG5Q9Y673 324 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 NT5C1B-RDH14C9J2C7 533 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 SEC22BO75396 215 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 HLA-DMAP28067 261 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 KIR2DL3P43628 341 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 NRIP1P48552 1158 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 SULT1E1P49888 294 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 DGKQP52824 942 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 LIMK1P53667 647 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 SCN1BQ07699 218 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 MADCAM1Q13477 382 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 QPRTQ15274 297 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 POU4F3Q15319 338 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 PFKFB4Q16877 469 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 SHQ1Q6PI26 577 aaKnown RBP12.52□□□□□ -0.4
HERC3-203ENST00000407637 ABHD15Q6UXT9 468 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 TMPRSS11AQ6ZMR5 421 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 PRSS42Q7Z5A4 293 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 ZFAND4Q86XD8 727 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 PGBD5Q8N414 524 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 CAMKK1Q8N5S9 505 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 OR52K2Q8NGK3 314 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 PROKR1Q8TCW9 393 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 ZNF668Q96K58 619 aaPredicted RBP12.52□□□□□ -0.4
HERC3-203ENST00000407637 C12orf42Q96LP6 360 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 LPIN3Q9BQK8 851 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 BRINP2Q9C0B6 783 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 DIMT1Q9UNQ2 313 aaKnown RBP12.52□□□□□ -0.4
HERC3-203ENST00000407637 ERVW-1Q9UQF0 538 aa12.52□□□□□ -0.4
HERC3-203ENST00000407637 CXCR6O00574 342 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 DCLK1O15075 740 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 RPS6KA4O75676 772 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 HOXD4P09016 255 aaPredicted RBP12.52□□□□□ -0.41
HERC3-203ENST00000407637 PRR35P0CG20 571 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 HOXA9P31269 272 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 CAP2P40123 477 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 RGS6P49758 472 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 ASAH1Q13510 395 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 GTF2H3Q13889 308 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 GNA13Q14344 377 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 PROX2Q3B8N5 592 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 PKDCCQ504Y2 493 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 CARD16Q5EG05 197 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 CPZQ66K79 652 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 ACOT1Q86TX2 421 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 NPWQ8N729 165 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 FNDC5Q8NAU1 212 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 PPHLN1Q8NEY8 458 aaKnown RBP12.52□□□□□ -0.41
HERC3-203ENST00000407637 DNAJA4Q8WW22 397 aaPredicted RBP12.52□□□□□ -0.41
HERC3-203ENST00000407637 IKZF5Q9H5V7 419 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 SEMA4BQ9NPR2 832 aaPredicted RBP12.52□□□□□ -0.41
HERC3-203ENST00000407637 GABRQQ9UN88 632 aa12.52□□□□□ -0.41
HERC3-203ENST00000407637 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ACSL4O60488 711 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 PTHP01270 115 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 SLC10A3P09131 477 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ELP6Q0PNE2 266 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 GPR19Q15760 415 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 AANATQ16613 207 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 GNASQ5JWF2 1037 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 HECTD2Q5U5R9 776 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 C16orf62Q7Z3J2 963 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 DPP10Q8N608 796 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ANKRD53Q8N9V6 530 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 OR2T11Q8NH01 316 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 SLC35F5Q8WV83 523 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 AKAP1Q92667 903 aaKnown RBP eCLIP12.51□□□□□ -0.41
HERC3-203ENST00000407637 GIMAP5Q96F15 307 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 HPDLQ96IR7 371 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 DCLRE1CQ96SD1 692 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 NIFKQ9BYG3 293 aaKnown RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 VAPAQ9P0L0 249 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 MYO1GB0I1T2 1018 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 FAM72CH0Y354 149 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 PPM1BO75688 479 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 MT-CYBP00156 380 aaPredicted RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 JCHAINP01591 159 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ITGB1P05556 798 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ERCC2P18074 760 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ALAS2P22557 587 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 BRCC3P46736 316 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 CDKN2DP55273 166 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 PER3P56645 1201 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 NFKB2Q00653 900 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 YWHAHQ04917 246 aaPredicted RBP12.51□□□□□ -0.41
HERC3-203ENST00000407637 SLC35F1Q5T1Q4 408 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 FAM72AQ5TYM5 149 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 ATF7IP2Q5U623 682 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 KIAA1614Q5VZ46 1190 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 EEF1DP3Q658K8 133 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 KDM4DQ6B0I6 523 aa12.51□□□□□ -0.41
HERC3-203ENST00000407637 FAM72DQ6L9T8 149 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms