RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC22A18Q96BI1 424 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 RBM18Q96H35 190 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC39A13Q96H72 371 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 GSDMCQ9BYG8 508 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 GRIP2Q9C0E4 1043 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 ZBP1Q9H171 429 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CD207Q9UJ71 328 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 KIAA0355O15063 1070 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 PCDH7O60245 1069 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CBSLP0DN79 551 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CBSP35520 551 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC26A3P40879 764 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 PTDSS1P48651 473 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 ERVK-8P63133 956 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC7A9P82251 487 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 C1orf61Q13536 156 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF542PQ5EBM4 170 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 REP15Q6BDI9 236 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 LPCAT2Q7L5N7 544 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CHMP1BQ7LBR1 199 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF607Q96SK3 696 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 TMEM245Q9H330 911 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CRISPLD1Q9H336 500 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 RAPGEFL1Q9UHV5 662 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 A8MUI8 341 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 TYROBPO43914 113 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 RNGTTO60942 597 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 KLKB1P03952 638 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 IMPDH2P12268 514 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 ANPEPP15144 967 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SPINT3P49223 89 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 ARRB1P49407 418 aaPredicted RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 UBAP2Q5T6F2 1119 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 OFCC1Q8IZS5 231 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 PGAM4Q8N0Y7 254 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 LMX1AQ8TE12 382 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 REXO5Q96IC2 774 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SMIM14Q96QK8 99 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 EXD2Q9NVH0 621 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 TAS2R1Q9NYW7 299 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 GIMAP2Q9UG22 337 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CDH22Q9UJ99 828 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 GTPBP1O00178 669 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CNOT3O75175 753 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 TIPRLO75663 272 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 RGRP47804 291 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SOX9P48436 509 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SERPINB10P48595 397 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 AAK1Q2M2I8 961 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CRTC1Q6UUV9 634 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 GOLGA7Q7Z5G4 137 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 OR10A6Q8NH74 314 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 KHSRPQ92945 711 aaKnown RBP eCLIP12.82□□□□□ -0.367e-7■■■■■ 29.3
PTPRN2-202ENST00000389416 LMAN2LQ9H0V9 348 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 XKR8Q9H6D3 395 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 USE1Q9NZ43 259 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CCL26Q9Y258 94 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 LRCH1Q9Y2L9 728 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 NUMA1Q14980 2115 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 AP3D1O14617 1153 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC35E2BP0CK96 405 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 CPN2P22792 545 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 HLA-FP30511 346 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 CASP9P55211 416 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 NADSYN1Q6IA69 706 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 KIAA2013Q8IYS2 634 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 TRAM1L1Q8N609 369 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 C1orf52Q8N6N3 182 aaKnown RBP12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC13A3Q8WWT9 602 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 BOCQ9BWV1 1114 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 ZCWPW2A0A1B0GU75 182 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 TNFRSF10BO14763 440 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 AURKAO14965 403 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 ERI3O43414 337 aaKnown RBP12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 ACRV1P26436 265 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 HSD17B2P37059 387 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 IFNGR2P38484 337 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 CDKN1CP49918 316 aaPredicted RBP12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF234Q14588 700 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 HKDC1Q2TB90 917 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 TRIM69Q86WT6 500 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 VANGL1Q8TAA9 524 aaPredicted RBP12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF317Q96PQ6 595 aaPredicted RBP12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 OLFM1Q99784 485 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 SEC14L3Q9UDX4 400 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 MAGEL2Q9UJ55 1249 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 RNF11Q9Y3C5 154 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 FAM20BO75063 409 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 PFKLP17858 780 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 CDKN2DP55273 166 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 DCUN1D3Q8IWE4 304 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 APOL4Q9BPW4 351 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 CNPPD1Q9BV87 410 aa12.81□□□□□ -0.36
PTPRN2-202ENST00000389416 ELOVL7A1L3X0 281 aa12.8□□□□□ -0.36
PTPRN2-202ENST00000389416 HHLA1C9JL84 531 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms