RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 SOCS4Q8WXH5 440 aa16.51■□□□□ 0.23
TSPAN3-201ENST00000267970 ST14Q9Y5Y6 855 aa16.51■□□□□ 0.23
TSPAN3-201ENST00000267970 CXCL11O14625 94 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 TREHO43280 583 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 PTGIRP43119 386 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 ABCA11PQ4W5N1 156 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 STYXQ8WUJ0 223 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 ZSWIM3Q96MP5 696 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 BCAS3Q9H6U6 928 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 MAP2P11137 1827 aaKnown RBP16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CYP3A7-CYP3A51PA0A087WV96 503 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 AKAP8O43823 692 aaKnown RBP16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CYP3A7P24462 503 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 EDNRAP25101 427 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 RASGEF1AQ8N9B8 481 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 RASSF5Q8WWW0 418 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CCDC177Q9NQR7 707 aaPredicted RBP16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 ALG5Q9Y673 324 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CSF2P04141 144 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 SRCP12931 536 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 TPSB2P20231 275 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 TPSAB1Q15661 275 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 HMGN2P46Q86SG4 172 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 PCDHGC3Q9UN70 934 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 RIPK3Q9Y572 518 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CXorf49A8MYA2 514 aaPredicted RBP16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 ZNF823P16415 610 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CSTF2P33240 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 MAPK8P45983 427 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 SLC6A9P48067 706 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 LRRC69Q6ZNQ3 347 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 KCTD9Q7L273 389 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 ARL14EPQ8N8R7 260 aaPredicted RBP16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CEP76Q8TAP6 659 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 SLC35G5Q96KT7 338 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 RNF121Q9H920 327 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 TRPV4Q9HBA0 871 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 TULP2O00295 520 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 CYP3A5P20815 502 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 GRM5P41594 1212 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 AMZ1Q400G9 498 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 LRRC37A5PQ49AS3 106 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 SPIN3Q5JUX0 258 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 ZCCHC12Q6PEW1 402 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 ARL9Q6T311 187 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 MARCH9Q86YJ5 346 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 COX18Q8N8Q8 333 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 FBXL20Q96IG2 436 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 BTN2A3PQ96KV6 586 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
TSPAN3-201ENST00000267970 SPATA31C2B4DYI2 1134 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 XPNPEP2O43895 674 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 PSEN1P49768 467 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 CRYBB1P53674 252 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 PIGFQ07326 219 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 MERTKQ12866 999 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 SCARB2Q14108 478 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 CNTD1Q8N815 330 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 GRPEL2Q8TAA5 225 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 CANT1Q8WVQ1 401 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 MCCC1Q96RQ3 725 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 SDCBP2Q9H190 292 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 AJAP1Q9UKB5 411 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 J3QLW9 94 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ZNF19P17023 458 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 XRCC1P18887 633 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 AP3S2P59780 193 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 IFI44LQ53G44 452 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 FAM46CQ5VWP2 391 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 SLC2A7Q6PXP3 512 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 SLC15A3Q8IY34 581 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 POGLUT1Q8NBL1 392 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ZNF471Q9BX82 626 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ARHGEF4Q9NR80 690 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 NUDT4Q9NZJ9 180 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 MED11Q9P086 117 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 E9PCH4 1651 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 SLC33A1O00400 549 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 H6PDO95479 791 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ALPIP09923 528 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 XKP51811 444 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 TCEAL6Q6IPX3 200 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 PCED1BQ96HM7 432 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 HSD17B14Q9BPX1 270 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 SMIM28A0A1B0GU29 152 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 KANTRA0A1W2PQU2 76 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 MATN2O00339 956 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ZNF16P17020 682 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 CDH4P55283 916 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 OR5J2Q8NH18 312 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 MRPS33Q9Y291 106 aaKnown RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ELOA3DA6NLF2 546 aaPredicted RBP16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 CILPO75339 1184 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ELOA3BQ3SY89 546 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 CEP68Q76N32 757 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ELOA3Q8NG57 546 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 OR52B2Q96RD2 323 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 ZNF700Q9H0M5 742 aa16.49■□□□□ 0.23
TSPAN3-201ENST00000267970 VNN3Q9NY84 501 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms