RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 LRRC72A6NJI9 287 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 MATN4O95460 622 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 CAPN1P07384 714 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 ERFP50548 548 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 THOP1P52888 689 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 IRF4Q15306 451 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 MBOAT1Q6ZNC8 495 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 VRK3Q8IV63 474 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 JADE3Q92613 823 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 HIC2Q96JB3 615 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 PACSIN3Q9UKS6 424 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 PDE10AQ9Y233 779 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 GPR45Q9Y5Y3 372 aa22.07■■□□□ 1.12
CDX1-201ENST00000231656 CFLARO15519 480 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 NRP2O60462 931 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 SEMA4FO95754 770 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 C8GP07360 202 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 ENO2P09104 434 aaPredicted RBP22.06■■□□□ 1.12
CDX1-201ENST00000231656 IDO1P14902 403 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 GDF5P43026 501 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 HSPA14Q0VDF9 509 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 CEACAM7Q14002 265 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 INPP5AQ14642 412 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 TRIM69Q86WT6 500 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 HEATR4Q86WZ0 1026 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 CHCHD4Q8N4Q1 142 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 RASGEF1AQ8N9B8 481 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 METTL6Q8TCB7 284 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 NRG4Q8WWG1 115 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 ASB11Q8WXH4 323 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 ASB12Q8WXK4 309 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 C1QTNF7Q9BXJ2 289 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 SLC12A9Q9BXP2 914 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 AIG1Q9NVV5 245 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 OPTCQ9UBM4 332 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 PCDHGA7Q9Y5G6 932 aa22.06■■□□□ 1.12
CDX1-201ENST00000231656 BDP1A6H8Y1 2624 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 K7EPI3 171 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 KPNA5O15131 536 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 ANPEPP15144 967 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 HTR6P50406 440 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 SESN3P58005 492 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 PSME3P61289 254 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 AP2B1P63010 937 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 CDKL1Q00532 357 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 BOP1Q14137 746 aaKnown RBP22.05■■□□□ 1.12
CDX1-201ENST00000231656 MMEL1Q495T6 779 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 HACD2Q6Y1H2 254 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 UBE2R2Q712K3 238 aaPredicted RBP22.05■■□□□ 1.12
CDX1-201ENST00000231656 COX14Q96I36 57 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 TPSD1Q9BZJ3 242 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 TRIM39Q9HCM9 518 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 S100A14Q9HCY8 104 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 RIC8BQ9NVN3 520 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 ANGPTL2Q9UKU9 493 aa22.05■■□□□ 1.12
CDX1-201ENST00000231656 OR2AG2A6NM03 316 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 MRASO14807 208 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 SLC31A1O15431 190 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 APBB3O95704 486 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 ANXA5P08758 320 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 TRIM23P36406 574 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 RPIAP49247 311 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 CTSCP53634 463 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 DIO3P55073 304 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 NME5P56597 212 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 CDK3Q00526 305 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 SIGLEC14Q08ET2 396 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 C8orf82Q6P1X6 216 aaPredicted RBP22.04■■□□□ 1.12
CDX1-201ENST00000231656 Q6ZSR9 355 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 NEK10Q6ZWH5 1172 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 MILR1Q7Z6M3 343 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 RASGRP3Q8IV61 690 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 ATP6V1E2Q96A05 226 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 TOE1Q96GM8 510 aaKnown RBP22.04■■□□□ 1.12
CDX1-201ENST00000231656 ZCCHC2Q9C0B9 1178 aaKnown RBP22.04■■□□□ 1.12
CDX1-201ENST00000231656 PARVBQ9HBI1 364 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 FZD3Q9NPG1 666 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 BBIP1A8MTZ0 92 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 C10orf142B7Z368 130 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 SLC16A5O15375 505 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 ZNF217O75362 1048 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 KATNA1O75449 491 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 FTH1P02794 183 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 TEAD1P28347 426 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 OXTRP30559 389 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 GGT5P36269 586 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 SP140Q13342 867 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 LRRC74BQ6ZQY2 392 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 ADGRG6Q86SQ4 1221 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 BEND7Q8N7W2 519 aaPredicted RBP22.04■■□□□ 1.12
CDX1-201ENST00000231656 ELMO1Q92556 727 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 ANKRD27Q96NW4 1050 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 LGR4Q9BXB1 951 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 TEX101Q9BY14 249 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 OR2AG1Q9H205 316 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 WSB2Q9NYS7 404 aaPredicted RBP22.04■■□□□ 1.12
CDX1-201ENST00000231656 ATXN10Q9UBB4 475 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 OR1A2Q9Y585 309 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 ANGPTL3Q9Y5C1 460 aa22.04■■□□□ 1.12
CDX1-201ENST00000231656 TECTAO75443 2155 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms