RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TRPC3Q13507 836 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 CUL2Q13617 745 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TUBB2AQ13885 445 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 VEZF1Q14119 521 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 SURF1Q15526 300 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 ZNF124Q15973 351 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TPD52L1Q16890 204 aaPredicted RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 FKBP15Q5T1M5 1219 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 ATG9BQ674R7 924 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 IRGCQ6NXR0 463 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 MSANTD2Q6P1R3 559 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 SEZ6L2Q6UXD5 910 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 STRADAQ7RTN6 431 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 PIGZQ86VD9 579 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 PELI3Q8N2H9 469 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TTC30BQ8N4P2 665 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 SLC4A11Q8NBS3 891 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 OR10Q1Q8NGQ4 319 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 SUN3Q8TAQ9 357 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 FAM57AQ8TBR7 257 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TFAP2BQ92481 460 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 GCDHQ92947 438 aaPredicted RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 PTERQ96BW5 349 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 ZNF501Q96CX3 271 aaPredicted RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 SLC2A13Q96QE2 648 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 AGAP2Q99490 1192 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 EIF3CQ99613 913 aaKnown RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 YIPF4Q9BSR8 244 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TUBB2BQ9BVA1 445 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TM6SF2Q9BZW4 377 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 NLRC4Q9NPP4 1024 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 TAS2R14Q9NYV8 317 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 CNOT8Q9UFF9 292 aaKnown RBP4.76□□□□□ -1.65
ERCC1-216ENST00000592444 DNAJC12Q9UKB3 198 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.76□□□□□ -1.651e-6■□□□□ 10.8
ERCC1-216ENST00000592444 NPFFR2Q9Y5X5 522 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 SPTBP11277 2137 aa4.76□□□□□ -1.65
ERCC1-216ENST00000592444 NOTCH3Q9UM47 2321 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 CCDC66A2RUB6 948 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 SYT5O00445 386 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 KRIT1O00522 736 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 GPRIN2O60269 458 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 WDPCPO95876 746 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 B3GALT4O96024 378 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 CALCAP01258 141 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 SERPING1P05155 500 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 UMODP07911 640 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 MYCLP1P12525 358 aaPredicted RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 SKILP12757 684 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 KRT13P13646 458 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 TNNI1P19237 187 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 CDK11BP21127 795 aaKnown RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ATICP31939 592 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 PTGS2P35354 604 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 PIK3CAP42336 1068 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ZFP36L2P47974 494 aaKnown RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 HADHBP55084 474 aaKnown RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 PPP1CAP62136 330 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ABRQ12979 859 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 BIRC3Q13489 604 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 SLC18A3Q16572 532 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 CLEC12BQ2HXU8 276 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 TDRD12Q587J7 1177 aaKnown RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ZNF667Q5HYK9 610 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 TCERG1LQ5VWI1 586 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 FBXO42Q6P3S6 717 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 IYDQ6PHW0 289 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 MON1BQ7L1V2 547 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 RRAGAQ7L523 313 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ENOSF1Q7L5Y1 443 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 WDR53Q7Z5U6 358 aaPredicted RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 UNC93AQ86WB7 457 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 SIAH3Q8IW03 269 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 CCDC170Q8IYT3 715 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 WDTC1Q8N5D0 677 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 RFLNBQ8N5W9 214 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 PCDH20Q8N6Y1 951 aaKnown RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 AMER3Q8N944 861 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 LRRC57Q8N9N7 239 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 NEK11Q8NG66 645 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 OR2Y1Q8NGV0 311 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 LINC01560Q8TB33 94 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 UBXN4Q92575 508 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 RSC1A1Q92681 617 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ZDHHC12Q96GR4 267 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 BAG1Q99933 345 aaPredicted RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 DESI2Q9BSY9 194 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 PACSIN1Q9BY11 444 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 FRMD8Q9BZ67 464 aaPredicted RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ISCUQ9H1K1 167 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 HAUS4Q9H6D7 363 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 NOL6Q9H6R4 1146 aaKnown RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 RMI1Q9H9A7 625 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ACTR5Q9H9F9 607 aaPredicted RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 TRIM10Q9UDY6 481 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 GPN3Q9UHW5 284 aaPredicted RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 ING1Q9UK53 422 aaPredicted RBP4.75□□□□□ -1.65
ERCC1-216ENST00000592444 TFR2Q9UP52 801 aa4.75□□□□□ -1.65
ERCC1-216ENST00000592444 AP4E1Q9UPM8 1137 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms