RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 OR4D9Q8NGE8 314 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 UHMK1Q8TAS1 419 aaKnown RBP14.38□□□□□ -0.11
RIOK3-210ENST00000584960 MCOLN3Q8TDD5 553 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 DCAKDQ8WVC6 231 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 MRRFQ96E11 262 aaKnown RBP14.38□□□□□ -0.11
RIOK3-210ENST00000584960 LINGO1Q96FE5 620 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 ZDHHC12Q96GR4 267 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 TMEM74Q96NL1 305 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 DEPDC7Q96QD5 511 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 SLC12A9Q9BXP2 914 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 TRIM54Q9BYV2 358 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 SRMSQ9H3Y6 488 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 OR6C2Q9NZP2 312 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.38□□□□□ -0.11
RIOK3-210ENST00000584960 LNPEPQ9UIQ6 1025 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 CLCA2Q9UQC9 943 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 TDRKHQ9Y2W6 561 aaKnown RBP14.38□□□□□ -0.11
RIOK3-210ENST00000584960 ENTPD2Q9Y5L3 495 aa14.38□□□□□ -0.11
RIOK3-210ENST00000584960 PRAMEF33A0A0G2JMD5 474 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 IQANK1A0A1B0GTG1 560 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ZNF839A8K0R7 811 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 TOX3O15405 576 aaPredicted RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 WISP3O95389 354 aaPredicted RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 TSPAN12O95859 305 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 MT-CO3P00414 261 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 SNRPAP09012 282 aaKnown RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ENO2P09104 434 aaPredicted RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 NUDT17P0C025 328 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 HIST1H2AGP0C0S8 130 aaPredicted RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 JUPP14923 745 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 HIST1H2ADP20671 130 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 CYP2A7P20853 494 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 PPM1FP49593 454 aaPredicted RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 SERPINB8P50452 374 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 RAB28P51157 221 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ATP6V0D1P61421 351 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 PRKAA1Q13131 559 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 TRA2AQ13595 282 aaKnown RBP eCLIP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ARHGAP19Q14CB8 494 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 MROH9Q5TGP6 573 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ARMC6Q6NXE6 501 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 RAPH1Q70E73 1250 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ERMP1Q7Z2K6 904 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 AMIGO1Q86WK6 493 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ZNF761Q86XN6 746 aaPredicted RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 TDRPQ86YL5 185 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 CARFQ8N187 725 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 DCBLD1Q8N8Z6 715 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 OR4E2Q8NGC2 313 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 OR9A1PQ8NGU1 263 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 NCSTNQ92542 709 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 HIST1H2AHQ96KK5 128 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 UBXN10Q96LJ8 280 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 HIST1H2AJQ99878 128 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 H2AFJQ9BTM1 129 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 HGH1Q9BTY7 390 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 DERL2Q9GZP9 239 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 HRASLS2Q9NWW9 162 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 SPATA7Q9P0W8 599 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 PDP2Q9P2J9 529 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 TLK1Q9UKI8 766 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 NOVA2Q9UNW9 492 aaKnown RBP14.37□□□□□ -0.11
RIOK3-210ENST00000584960 ACOT9Q9Y305 439 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 NFS1Q9Y697 457 aa14.37□□□□□ -0.11
RIOK3-210ENST00000584960 A0A087X1B8 175 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 CCDC189A1A4V9 331 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 HMX2A2RU54 273 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 CCDC151A5D8V7 595 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 PABPN1LA6NDY0 278 aaKnown RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 OR5K3A6NET4 321 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 D6RAR5 112 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 RASGRF2O14827 1237 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 MPOP05164 745 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 TYK2P29597 1187 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 CCKBRP32239 447 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 CAPZBP47756 277 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 HES3Q5TGS1 186 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 TMEM207Q6UWW9 146 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 TIFABQ6ZNK6 161 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 USP53Q70EK8 1073 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 UBE2R2Q712K3 238 aaPredicted RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 PIWIL4Q7Z3Z4 852 aaKnown RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 HMGCLL1Q8TB92 370 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 ISL2Q96A47 359 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 SLC22A18Q96BI1 424 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 CABS1Q96KC9 395 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 CD180Q99467 661 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 ROPN1BQ9BZX4 212 aaPredicted RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 STRADBQ9C0K7 418 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 SYNDIG1Q9H7V2 258 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 ROPN1Q9HAT0 212 aaPredicted RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 PARVBQ9HBI1 364 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 OGFRQ9NZT2 677 aa14.36□□□□□ -0.11
RIOK3-210ENST00000584960 PSMC3IPQ9P2W1 217 aaPredicted RBP14.36□□□□□ -0.11
RIOK3-210ENST00000584960 ARHGEF33A8MVX0 844 aa14.35□□□□□ -0.11
RIOK3-210ENST00000584960 MYO1CO00159 1063 aa14.35□□□□□ -0.11
RIOK3-210ENST00000584960 CTIFO43310 598 aaKnown RBP14.35□□□□□ -0.11
RIOK3-210ENST00000584960 FKBP9O95302 570 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms