RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 FAM234BA2RU67 622 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SLC30A4O14863 429 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 RSL1D1O76021 490 aaKnown RBP17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 CLCN7P51798 805 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 ZDHHC21Q8IVQ6 265 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 NAT8LQ8N9F0 302 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 DGCR14Q96DF8 476 aaKnown RBP17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 ZCCHC3Q9NUD5 404 aaKnown RBP17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 A0A1W2PRB8 838 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 hCG_2039718K7EN88 272 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 TCEA3O75764 348 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 ALOX5P09917 674 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 IMPDH1P20839 514 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 CTSOP43234 321 aaPredicted RBP17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 NUP54Q7Z3B4 507 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 LRRTM4Q86VH4 590 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 BPIFB1Q8TDL5 484 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SMURF2Q9HAU4 748 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 MBD2Q9UBB5 411 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 HAS3O00219 553 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 TAF4O00268 1085 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 PRODHO43272 600 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 CFIP05156 583 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 CASP9P55211 416 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SLBPQ14493 270 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 Q6ZVU0 165 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 AHSA2Q719I0 299 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 DPYSL5Q9BPU6 564 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 PLEKHA1Q9HB21 404 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 EDDM13A0A1B0GTR0 161 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SLC22A2O15244 555 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 AOC2O75106 756 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SYN1P17600 705 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 NFKB2Q00653 900 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 LACTB2Q53H82 288 aaPredicted RBP17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SIRPB2Q5JXA9 342 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SLC8B1Q6J4K2 584 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 GALNT7Q86SF2 657 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 SLC35F5Q8WV83 523 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 CHID1Q9BWS9 393 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 BCAS3Q9H6U6 928 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 USP29Q9HBJ7 922 aa17.11■□□□□ 0.33
PCDHA8-202ENST00000531613 DCLK1O15075 740 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 GADD45GO95257 159 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 PRPS1L1P21108 318 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 PRKCHP24723 683 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CCND3P30281 292 aaPredicted RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 BICRALQ6AI39 1079 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 ZNF483Q8TF39 744 aaPredicted RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 GTPBP3Q969Y2 492 aaKnown RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 PYCR2Q96C36 320 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 ALKBH4Q9NXW9 302 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CPSF4LA6NMK7 179 aaKnown RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CSNK2A2P19784 350 aaPredicted RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CBX5P45973 191 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 SLC11A1P49279 550 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 PRAMEF14Q5SWL7 426 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 PRAMEF13Q5VWM6 474 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CXorf57Q6NSI4 855 aaKnown RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 PJA1Q8NG27 643 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 ZNF461Q8TAF7 563 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CYB5D2Q8WUJ1 264 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CYP2S1Q96SQ9 504 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 ATXN10Q9UBB4 475 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 VIPR1P32241 457 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 DNASE1L1P49184 302 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CHRNA6Q15825 494 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 TNFAIP8L2Q6P589 184 aaPredicted RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 PIWIL1Q96J94 861 aaKnown RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 TRIM2Q9C040 744 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 VPS29Q9UBQ0 182 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 NCK1P16333 377 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 RFC2P35250 354 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 ACVRL1P37023 503 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 NCBP2P52298 156 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 TMEM63BQ5T3F8 832 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 HFE2Q6ZVN8 426 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 CMTM8Q8IZV2 173 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 C11orf24Q96F05 449 aaPredicted RBP17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 TLR9Q9NR96 1032 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 DHRS7Q9Y394 339 aa17.1■□□□□ 0.33
PCDHA8-202ENST00000531613 RBMXL2O75526 392 aaKnown RBP17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 DHFRP00374 187 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 ZNF30P17039 623 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 ATP5A1P25705 553 aaKnown RBP17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 SMCO1Q147U7 214 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 SLC30A8Q8IWU4 369 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 ZNF347Q96SE7 839 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 CCM2Q9BSQ5 444 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 THUMPD1Q9NXG2 353 aaKnown RBP17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 RLN1P04808 185 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 ALPPP05187 535 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 LCN1P1Q5VSP4 162 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 OLFML2AQ68BL7 652 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 LAPTM4BQ86VI4 370 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 NATD1Q8N6N6 113 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
PCDHA8-202ENST00000531613 SNX7Q9UNH6 387 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms