RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 COPS8Q99627 209 aa20.3■□□□□ 0.84
CHKA-206ENST00000531341 WDR77Q9BQA1 342 aaPredicted RBP20.3■□□□□ 0.84
CHKA-206ENST00000531341 C17orf62Q9BQA9 187 aa20.3■□□□□ 0.84
CHKA-206ENST00000531341 MVB12BQ9H7P6 319 aa20.3■□□□□ 0.84
CHKA-206ENST00000531341 AP1M2Q9Y6Q5 423 aa20.3■□□□□ 0.84
CHKA-206ENST00000531341 TACC2O95359 2948 aa20.3■□□□□ 0.84
CHKA-206ENST00000531341 AGPSO00116 658 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 HNRNPRO43390 633 aaKnown RBP20.29■□□□□ 0.84
CHKA-206ENST00000531341 IGHEP01854 428 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 RALBP11234 206 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 ITGAXP20702 1163 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 ITGA3P26006 1051 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 CD151P48509 253 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 CYP2A13Q16696 494 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 FAM20CQ8IXL6 584 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 OR5AR1Q8NGP9 310 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 PROKR1Q8TCW9 393 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 IQCDQ96DY2 449 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 QKIQ96PU8 341 aaKnown RBP eCLIP20.29■□□□□ 0.841e-7■■□□□ 13
CHKA-206ENST00000531341 VAT1Q99536 393 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 CHP1Q99653 195 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 AP1M1Q9BXS5 423 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 SLC6A20Q9NP91 592 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 SPTLC3Q9NUV7 552 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 IFNKQ9P0W0 207 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 FBXL4Q9UKA2 621 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 ENTPD4Q9Y227 616 aa20.29■□□□□ 0.84
CHKA-206ENST00000531341 IGLV3-16A0A075B6K0 115 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 CCDC78A2IDD5 438 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 C5orf60A6NFR6 353 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 GOLGA6L22H0YM25 854 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 ZSCAN9O15535 394 aaPredicted RBP20.28■□□□□ 0.84
CHKA-206ENST00000531341 RBL1P28749 1068 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 AIMP2Q13155 320 aaKnown RBP20.28■□□□□ 0.84
CHKA-206ENST00000531341 IGFL2Q6UWQ7 119 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 SNX20Q7Z614 316 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 DNAJC22Q8N4W6 341 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 CLDN19Q8N6F1 224 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 DNAJB14Q8TBM8 379 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 PPP4R1Q8TF05 950 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 GBA3Q9H227 469 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 GOLPH3Q9H4A6 298 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 TRHDEQ9UKU6 1024 aa20.28■□□□□ 0.84
CHKA-206ENST00000531341 SOCS6O14544 535 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 KLHL41O60662 606 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 CHRM5P08912 532 aaPredicted RBP20.27■□□□□ 0.84
CHKA-206ENST00000531341 ZNF140P52738 457 aaPredicted RBP20.27■□□□□ 0.84
CHKA-206ENST00000531341 GEMP55040 296 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 PRAMEF13Q5VWM6 474 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 CAVIN1Q6NZI2 390 aaKnown RBP20.27■□□□□ 0.84
CHKA-206ENST00000531341 HOOK3Q86VS8 718 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 FAR1Q8WVX9 515 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.27■□□□□ 0.84
CHKA-206ENST00000531341 ULK4Q96C45 1275 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 TXLNGQ9NUQ3 528 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 ZDHHC3Q9NYG2 299 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 PLAGL1Q9UM63 463 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 KLHL20Q9Y2M5 609 aa20.27■□□□□ 0.84
CHKA-206ENST00000531341 hCG_1818297A0A087WSY0 165 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 SPOPO43791 374 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 AKR1B10O60218 316 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 EDN3P14138 238 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 ALAS2P22557 587 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 PEBP1P30086 187 aaKnown RBP20.26■□□□□ 0.83
CHKA-206ENST00000531341 MC4RP32245 332 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 SLC1A1P43005 524 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 GCGRP47871 477 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 DENND5AQ6IQ26 1287 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 NAPRTQ6XQN6 538 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 SERPINA9Q86WD7 417 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 RHOT2Q8IXI1 618 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 MESP1Q9BRJ9 268 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 PRSS21Q9Y6M0 314 aa20.26■□□□□ 0.83
CHKA-206ENST00000531341 A0A0J9YY10 115 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 CFAP99D6REC4 459 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 CD63P08962 238 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 ITGALP20701 1170 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 ACRV1P26436 265 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 PSMB4P28070 264 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 GRNP28799 593 aaKnown RBP20.25■□□□□ 0.83
CHKA-206ENST00000531341 TSFMP43897 325 aaKnown RBP20.25■□□□□ 0.83
CHKA-206ENST00000531341 MARCKSL1P49006 195 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 CDC16Q13042 620 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 RPA4Q13156 261 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 SPARCL1Q14515 664 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 BRD3Q15059 726 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 TFDP3Q5H9I0 405 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 FJX1Q86VR8 437 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 MCEMP1Q8IX19 187 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 PARP9Q8IXQ6 854 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 LMNTD1Q8N9Z9 388 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 CATSPER1Q8NEC5 780 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.25■□□□□ 0.83
CHKA-206ENST00000531341 CNDP1Q96KN2 507 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 DNAJC7Q99615 494 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 HEMGNQ9BXL5 484 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 CHRNA10Q9GZZ6 450 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 IRAK4Q9NWZ3 460 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 CDC23Q9UJX2 597 aa20.25■□□□□ 0.83
CHKA-206ENST00000531341 TDRKHQ9Y2W6 561 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms