RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 ZNF462Q96JM2 2506 aa10.28□□□□□ -0.76
NELFE-213ENST00000494956 PCSK5Q92824 1860 aa10.27□□□□□ -0.76
NELFE-213ENST00000494956 GCN1Q92616 2671 aaKnown RBP10.27□□□□□ -0.77
NELFE-213ENST00000494956 PIPSLA2A3N6 862 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 USP27XA6NNY8 438 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 C2orf74A8MZ97 194 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 SLC28A2O43868 658 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 VAPBO95292 243 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 CHRM5P08912 532 aaPredicted RBP10.27□□□□□ -0.77
NELFE-213ENST00000494956 CCNYL3P0C7X3 344 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 TPSB2P20231 275 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 CCR10P46092 362 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 BDKRB1P46663 353 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 NPY2RP49146 381 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 EIF3BP55884 814 aaKnown RBP10.27□□□□□ -0.77
NELFE-213ENST00000494956 KCNAB2Q13303 367 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 LAMB3Q13751 1172 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 TPSAB1Q15661 275 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 PTCHD3Q3KNS1 767 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 CCSMST1Q4G0I0 132 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 ZNF789Q5FWF6 425 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 CTSL3PQ5NE16 218 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 LYPLAL1Q5VWZ2 237 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 LRRC8BQ6P9F7 803 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 SPESP1Q6UW49 350 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 NLRP9Q7RTR0 991 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 CAND1Q86VP6 1230 aaKnown RBP10.27□□□□□ -0.77
NELFE-213ENST00000494956 TMEM151BQ8IW70 566 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 TBC1D21Q8IYX1 336 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 SLC22A15Q8IZD6 547 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 AGGF1Q8N302 714 aaeCLIP10.27□□□□□ -0.77
NELFE-213ENST00000494956 OR5K2Q8NHB8 316 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 MAIP1Q8WWC4 291 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 CPT1BQ92523 772 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 MR1Q95460 341 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 MAGOHBQ96A72 148 aaKnown RBP10.27□□□□□ -0.77
NELFE-213ENST00000494956 PITPNM3Q9BZ71 974 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 IL22Q9GZX6 179 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 P2RY12Q9H244 342 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 CHST8Q9H2A9 424 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 ACTL8Q9H568 366 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 GEMIN8Q9NWZ8 242 aaKnown RBP10.27□□□□□ -0.77
NELFE-213ENST00000494956 GALPQ9UBC7 116 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 ANAPC5Q9UJX4 755 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 SOX13Q9UN79 622 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 NFS1Q9Y697 457 aa10.27□□□□□ -0.77
NELFE-213ENST00000494956 MED13Q9UHV7 2174 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 ISM1B1AKI9 464 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 QSOX1O00391 747 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 PRMT5O14744 637 aaPredicted RBP10.26□□□□□ -0.77
NELFE-213ENST00000494956 CPNE3O75131 537 aaKnown RBP10.26□□□□□ -0.77
NELFE-213ENST00000494956 NIPSNAP2O75323 286 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 GPC4O75487 556 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 CREG1O75629 220 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 DNAJB5O75953 348 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 AOAHP28039 575 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 FMO4P31512 558 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 COILP38432 576 aaPredicted RBP10.26□□□□□ -0.77
NELFE-213ENST00000494956 GABRA4P48169 554 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 FOXL2P58012 376 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 IL10RAQ13651 578 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 GRB7Q14451 532 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 PLEKHS1Q5SXH7 462 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 TMTC4Q5T4D3 741 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 PTRHD1Q6GMV3 140 aaKnown RBP10.26□□□□□ -0.77
NELFE-213ENST00000494956 C19orf47Q8N9M1 422 aaKnown RBP10.26□□□□□ -0.77
NELFE-213ENST00000494956 LINC01555Q8NAE3 123 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 ABHD17AQ96GS6 310 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 SGSM3Q96HU1 749 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 OSBPL9Q96SU4 736 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 TTC1Q99614 292 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 MENTQ9BUN1 341 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 EFHD1Q9BUP0 239 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 KIFC1Q9BW19 673 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 CARD6Q9BX69 1037 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 TRIM55Q9BYV6 548 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 TWSG1Q9GZX9 223 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 SPRTNQ9H040 489 aaPredicted RBP10.26□□□□□ -0.77
NELFE-213ENST00000494956 SLC25A18Q9H1K4 315 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 CRYL1Q9Y2S2 319 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 NEU2Q9Y3R4 380 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 JRKLQ9Y4A0 524 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 KCNMB2Q9Y691 235 aa10.26□□□□□ -0.77
NELFE-213ENST00000494956 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.25□□□□□ -0.77
NELFE-213ENST00000494956 J3QKU1 62 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 MATN2O00339 956 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 NRDCO43847 1150 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 NDUFS3O75489 264 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 MT-ND3P03897 115 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 GSTM1P09488 218 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 PKLRP30613 574 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 SHMT2P34897 504 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 TTPAP49638 278 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 GSTM4Q03013 218 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 CHAF1BQ13112 559 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 KYNUQ16719 465 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 CPZQ66K79 652 aa10.25□□□□□ -0.77
NELFE-213ENST00000494956 CASC4Q6P4E1 433 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms