RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SNX12Q9UMY4 172 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CDC14AQ9UNH5 594 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TMED5Q9Y3A6 229 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 C2CD2Q9Y426 696 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CMAHPQ9Y471 501 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 COMMD3-BMI1R4GMX3 469 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLIT3O75094 1523 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 MROH7Q68CQ1 1323 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TAF1P21675 1872 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ADAMTSL3P82987 1691 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 DISP2A7MBM2 1401 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 MYH10P35580 1976 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 GPR75-ASB3A0A0A6YYF3 556 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 A0A1B0GVT2 93 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 INAFM1C9JVW0 142 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 CTDSP2O14595 271 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 OGG1O15527 345 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZIC3O60481 467 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 HIST1H2ABP04908 130 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 GYPCP04921 128 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATP1A1P05023 1023 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 HOXB7P09629 217 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 LINGO3P0C6S8 592 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 NR2F1P10589 423 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 G6PDP11413 515 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 HIST1H2ADP20671 130 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SAT1P21673 171 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 UBA1P22314 1058 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 CTNNA1P35221 906 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 HSPA9P38646 679 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCT6AP40227 531 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 NNMTP40261 264 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 EIF2S3P41091 472 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 PPP1R2P41236 205 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SERPINB8P50452 374 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 MXI1P50539 228 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 PGGT1BP53609 377 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 GRIK2Q13002 908 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 PNOCQ13519 176 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLC39A14Q15043 492 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 TAF7Q15545 349 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 EIF2S3LQ2VIR3 472 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 LRIF1Q5T3J3 769 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 KCTD16Q68DU8 428 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 TYW3Q6IPR3 259 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 HIST3H2AQ7L7L0 130 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 TRPM8Q7Z2W7 1104 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 PPP1R42Q7Z4L9 355 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 AACSQ86V21 672 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 ST13P4Q8IZP2 240 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SYCP3Q8IZU3 236 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 CNBD1Q8NA66 436 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 POC5Q8NA72 575 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 STKLD1Q8NE28 680 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 TRPC4APQ8TEL6 797 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 RSPH1Q8WYR4 309 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 TEKT1Q969V4 418 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 TXNDC15Q96J42 360 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 COG3Q96JB2 828 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 CATSPER2Q96P56 530 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLF1Q9BQI6 1058 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SRSF8Q9BRL6 282 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 TIPINQ9BVW5 301 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SF3B5Q9BWJ5 86 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 CARD9Q9H257 536 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 HSD3B7Q9H2F3 369 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 ACSS1Q9NUB1 689 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 AATFQ9NY61 560 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 SEC63Q9UGP8 760 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 MAN1B1Q9UKM7 699 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 AGO1Q9UL18 857 aaKnown RBP4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 ASB3Q9Y575 518 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 INSL5Q9Y5Q6 135 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 PTGDR2Q9Y5Y4 395 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 CLIC4Q9Y696 253 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 PCSK5Q92824 1860 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 STK36Q9NRP7 1315 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 NWD2Q9ULI1 1742 aa4.38□□□□□ -1.71
HMGB1P16-201ENST00000447155 LTN1O94822 1766 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 A0A0D9SFI3 127 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCDC162PA2VCL2 907 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MAGEA13PA6NCF6 341 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATP2A1O14983 1001 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 PLOD3O60568 738 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MITFO75030 526 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ENTPD3O75355 529 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ERAL1O75616 437 aaKnown RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 CH25HO95992 272 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 KRT14P02533 472 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 CDK4P11802 303 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 SELLP14151 372 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 CPA3P15088 417 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ANXA7P20073 488 aaKnown RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ACADLP28330 430 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 STX2P32856 288 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MSH2P43246 934 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 NRIP1P48552 1158 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 IFI35P80217 286 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ABATP80404 500 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MRPS5P82675 430 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms