RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 HSPB3Q12988 150 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 MPP2Q14168 576 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 CASP12Q6UXS9 341 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 GAREM2Q75VX8 874 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 SCML4Q8N228 414 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 FBXW8Q8N3Y1 598 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 AADATQ8N5Z0 425 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 TERB1Q8NA31 727 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 FAM13CQ8NE31 585 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 RTP4Q96DX8 246 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 EFCAB11Q9BUY7 163 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 NENFQ9UMX5 172 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 DHRS7Q9Y394 339 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 SPO11Q9Y5K1 396 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 LDB2O43679 373 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 TCEAL5Q5H9L2 206 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 GLYATQ6IB77 296 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 SMPDL3AQ92484 453 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 KLHDC7BQ96G42 594 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 PRRG3Q9BZD7 231 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 RC3H2Q9HBD1 1191 aaKnown RBP12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 BATF3Q9NR55 127 aa12.84□□□□□ -0.35
PTPRN2-202ENST00000389416 DYTNA2CJ06 578 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 LIN7AO14910 233 aaPredicted RBP12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 PFDN1O60925 122 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 SERPINB7O75635 380 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 CST1P01037 141 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 MT-ND1P03886 318 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 AGTR2P50052 363 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 TMED1Q13445 227 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 HEPACAMQ14CZ8 416 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 SHHQ15465 462 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 CST6Q15828 149 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 TMEM240Q5SV17 173 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 FRG2Q64ET8 278 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 HTR3DQ70Z44 454 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 PIGWQ7Z7B1 504 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 ADCK1Q86TW2 530 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 OR4F6Q8NGB9 312 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 MOCOSQ96EN8 888 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 FRG2BQ96QU4 278 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 GTPBP2Q9BX10 602 aaKnown RBP12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 GPR174Q9BXC1 333 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 SEMA3GQ9NS98 782 aa12.83□□□□□ -0.35
PTPRN2-202ENST00000389416 TRIM43BA6NCK2 446 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 CAPN8A6NHC0 703 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 CD72P21854 359 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SPPL2CQ8IUH8 684 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 PHF10Q8WUB8 498 aaKnown RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 RAB7BQ96AH8 199 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 TRIM43Q96BQ3 446 aaPredicted RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 MGME1Q9BQP7 344 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SPATA5L1Q9BVQ7 753 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 RAB11FIP5Q9BXF6 653 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 CEP44Q9C0F1 390 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 AKTIPQ9H8T0 292 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 FZD3Q9NPG1 666 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SH3GLB1Q9Y371 365 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SAMHD1Q9Y3Z3 626 aaKnown RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 RREB1Q92766 1687 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SUV39H1O43463 412 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SRPRAP08240 638 aaKnown RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 ALPPL2P10696 532 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 STXBP1P61764 594 aaKnown RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 RPS21P63220 83 aaKnown RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 PCLAFQ15004 111 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 VN1R5Q7Z5H4 357 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 THOC6Q86W42 341 aaKnown RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 LPGAT1Q92604 370 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 PEX13Q92968 403 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SCRN2Q96FV2 425 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 KCNA7Q96RP8 456 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 TPSD1Q9BZJ3 242 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC9A8Q9Y2E8 581 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 FAM58BPP0C7Q3 252 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 C6P13671 934 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 BPIP17213 487 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 TYRP1P17643 537 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 NDUFS1P28331 727 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 CCR8P51685 355 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 USP39Q53GS9 565 aaKnown RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 RINLQ6ZS11 566 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 CEP97Q8IW35 865 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 C10orf82Q8WW14 230 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 ZNF184Q99676 751 aaPredicted RBP12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 VPS29Q9UBQ0 182 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 PAPPA2Q9BXP8 1791 aa12.83□□□□□ -0.36
PTPRN2-202ENST00000389416 DRGXA6NNA5 263 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 WASH3PC4AMC7 463 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CLDN4O14493 209 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 CLPTM1O96005 669 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 RXRGP48443 463 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 ARCN1P48444 511 aaKnown RBP12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 SLC18A1P54219 525 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 PNLIPRP1P54315 467 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 LIPEQ05469 1076 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 RUNX1T1Q06455 604 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 DPY19L2P1Q6NXN4 242 aa12.82□□□□□ -0.36
PTPRN2-202ENST00000389416 RSPO2Q6UXX9 243 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms