RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 ITM2CQ9NQX7 267 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 ACSS2Q9NR19 701 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 MBNL1Q9NR56 388 aaKnown RBP11.8□□□□□ -0.52
USF1-203ENST00000368021 DNAJC28Q9NX36 388 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 GULP1Q9UBP9 304 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 ZDHHC2Q9UIJ5 367 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 PTBP2Q9UKA9 531 aaKnown RBP11.8□□□□□ -0.52
USF1-203ENST00000368021 ADAMTS6Q9UKP5 1117 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 DNMT3AQ9Y6K1 912 aaPredicted RBP11.8□□□□□ -0.52
USF1-203ENST00000368021 GPR179Q6PRD1 2367 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 DMXL1Q9Y485 3027 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 TMEM202A6NGA9 273 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 NCF1BA6NI72 391 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 LRRC72A6NJI9 287 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 NCF1CA8MVU1 366 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 C10orf142B7Z368 130 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 HDAC3O15379 428 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 MATN4O95460 622 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 S100BP04271 92 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 NCF1P14598 390 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 EEF1DP29692 281 aaKnown RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 PHEXP78562 749 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 PHKG1Q16816 387 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 SYTL3Q4VX76 610 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 SPDYAQ5MJ70 313 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 SULT1C3Q6IMI6 304 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 MAVSQ7Z434 540 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 CUZD1Q86UP6 607 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 VRK3Q8IV63 474 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 ZNF547Q8IVP9 402 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 ALDH16A1Q8IZ83 802 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 SLC22A15Q8IZD6 547 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 AFAP1L2Q8N4X5 818 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 FITM2Q8N6M3 262 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 FRMD1Q8N878 549 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 ZBTB8BQ8NAP8 495 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 ZBTB44Q8NCP5 570 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 TRIM54Q9BYV2 358 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 IRF2BPLQ9H1B7 796 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 PARVBQ9HBI1 364 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 PHPT1Q9NRX4 125 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 ABCF3Q9NUQ8 709 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 TBCCD1Q9NVR7 557 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 PCTPQ9UKL6 214 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 PRR23AA6NEV1 266 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 AXIN1O15169 862 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 HRO43593 1189 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 HNRNPCL1O60812 293 aaKnown RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 ATP6V1G1O75348 118 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 MLYCDO95822 493 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 FGF4P08620 206 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 MYCLP1P12525 358 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 RPIAP49247 311 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 CLCN2P51788 898 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 AP1S2P56377 157 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 PPP2CBP62714 309 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 PPP2CAP67775 309 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 CLCQ05315 142 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 LCP2Q13094 533 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 TTC23LQ6PF05 361 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 ZC3H14Q6PJT7 736 aaKnown RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 PRR23BQ6ZRT6 265 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 UBE2R2Q712K3 238 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 C11orf96Q7Z7L8 435 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 LONP2Q86WA8 852 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 FAM160A2Q8N612 972 aaPredicted RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 OR2L2Q8NH16 312 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 HM13Q8TCT9 377 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 UBTD2Q8WUN7 234 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 SKA1Q96BD8 255 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 LGR4Q9BXB1 951 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 DPEP2Q9H4A9 486 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 SPATA7Q9P0W8 599 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 HEY2Q9UBP5 337 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 TSR3Q9UJK0 312 aaKnown RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 APOBEC2Q9Y235 224 aaKnown RBP11.79□□□□□ -0.52
USF1-203ENST00000368021 PCDHGA2Q9Y5H1 932 aa11.79□□□□□ -0.52
USF1-203ENST00000368021 RIF1Q5UIP0 2472 aaKnown RBP11.78□□□□□ -0.52
USF1-203ENST00000368021 GON4LQ3T8J9 2241 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 DPPA5A6NC42 116 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 MAGEA13PA6NCF6 341 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 MGAT4DA6NG13 374 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 E2F3O00716 465 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 UBFD1O14562 309 aaKnown RBP11.78□□□□□ -0.52
USF1-203ENST00000368021 PSIP1O75475 530 aaKnown RBP11.78□□□□□ -0.52
USF1-203ENST00000368021 ANXA5P08758 320 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 HOXC4P09017 264 aaPredicted RBP11.78□□□□□ -0.52
USF1-203ENST00000368021 ZNF24P17028 368 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 CYP2A7P20853 494 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 ACSL1P33121 698 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 IGFALSP35858 605 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 AGTR2P50052 363 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 HNMTP50135 292 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 ARHGAP8P85298 464 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 SPIDRQ14159 915 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 EPGNQ6UW88 154 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 RPS27LQ71UM5 84 aaKnown RBP11.78□□□□□ -0.52
USF1-203ENST00000368021 FAM124AQ86V42 546 aa11.78□□□□□ -0.52
USF1-203ENST00000368021 LRRTM4Q86VH4 590 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 544 ms