RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ZBED6CLQ96FA7 236 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 CDK15Q96Q40 435 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 MAT2BQ9NZL9 334 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 STX16O14662 325 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 AREL1O15033 823 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 FRG2Q64ET8 278 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 LRRC70Q7Z2Q7 622 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 TREML1Q86YW5 311 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 SAMD14Q8IZD0 417 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 RGL4Q8IZJ4 473 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 ADGRG2Q8IZP9 1017 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 FRG2BQ96QU4 278 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 S100A13Q99584 98 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 PKP2Q99959 881 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 CHCHD6Q9BRQ6 235 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 C16orf70Q9BSU1 422 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 TMEM27Q9HBJ8 222 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 POPDC3Q9HBV1 291 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC25A12O75746 678 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 RNASEH2AO75792 299 aaKnown RBP16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 GADD45GO95257 159 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 SNAI1O95863 264 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 PSMD8P48556 350 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 ECT2LQ008S8 904 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 TRIM32Q13049 653 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 RTL4Q6ZR62 310 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 PLD6Q8N2A8 252 aaKnown RBP16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR9I1Q8NGQ6 314 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 WFIKKN2Q8TEU8 576 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAR1Q8WVX9 515 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 IPCEF1Q8WWN9 437 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 RFKQ969G6 155 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 C1orf74Q96LT6 269 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF570Q96NI8 536 aa16.77■□□□□ 0.27
TRAPPC11-201ENST00000334690 FAM240BA0A1B0GVZ2 78 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 PRAMEF11O60813 436 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 NPPAP01160 153 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 CMPK1P30085 196 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 HKDC1Q2TB90 917 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 NADK2Q4G0N4 442 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 BEND5Q7L4P6 421 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 ERMP1Q7Z2K6 904 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 TMEM135Q86UB9 458 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 KCNJ9Q92806 393 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC2A13Q96QE2 648 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 CIDEBQ9UHD4 219 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 CLIC1O00299 241 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 OR1F1O43749 312 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 F7P08709 466 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 ACADVLP49748 655 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZBED5Q49AG3 693 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 RBM48Q5RL73 367 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 AKAP14Q86UN6 197 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 ERI1Q8IV48 349 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC30A8Q8IWU4 369 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 TMEM175Q9BSA9 504 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 TXLNGYQ9BZA5 131 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 NEK6Q9HC98 313 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 DUS2Q9NX74 493 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 PTBP2Q9UKA9 531 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 IGKV6D-21A0A0A0MT36 114 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 PCDH7O60245 1069 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 NME6O75414 186 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 NR4A1P22736 598 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 CRHR2Q13324 411 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 PIK3R6Q5UE93 754 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 B3GNT9Q6UX72 402 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 CDHR3Q6ZTQ4 885 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 LAPTM4BQ86VI4 370 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 UBAP1Q9NZ09 502 aa16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 COL2A1P02458 1487 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-201ENST00000334690 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PSMD11O00231 422 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 DHFRP00374 187 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 INHAP05111 366 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 CBSLP0DN79 551 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 SAGP10523 405 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 CD247P20963 164 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 CBSP35520 551 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 UBXN11Q5T124 520 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 OTOP2Q7RTS6 562 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PYCR2Q96C36 320 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 HTATIP2Q9BUP3 242 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 ING4Q9UNL4 249 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 ZNF99A8MXY4 864 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 NOBOXO60393 691 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 C8BP07358 591 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 SRPRAP08240 638 aaKnown RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 TAF13Q15543 124 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 DDI2Q5TDH0 399 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 BRAT1Q6PJG6 821 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 PDSS2Q86YH6 399 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 NATD1Q8N6N6 113 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 SLC9A6Q92581 669 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 GPATCH1Q9BRR8 931 aaKnown RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 ING3Q9NXR8 418 aa16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 AKAP7Q9P0M2 348 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-201ENST00000334690 MTRRQ9UBK8 725 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms