RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TNFP01375 233 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 CATP04040 527 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 BDKRB1P46663 353 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 SLC1A6P48664 564 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 RPIAP49247 311 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 AGTR2P50052 363 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 CTBSQ01459 385 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 TERF2Q15554 542 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 PMS2CLQ68D20 193 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 SULT1C3Q6IMI6 304 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 WASH2PQ6VEQ5 465 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 LPCAT2Q7L5N7 544 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 RAB44Q7Z6P3 723 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 SPATS2Q86XZ4 545 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 NRROSQ86YC3 692 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 CCNYL1Q8N7R7 359 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 MCOLN3Q8TDD5 553 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 ZNF483Q8TF39 744 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 SKA2Q8WVK7 121 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 FBXL8Q96CD0 374 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 MOCOSQ96EN8 888 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 CNDP1Q96KN2 507 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 FOPNLQ96NB1 174 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 CCT8L2Q96SF2 557 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 TMEM79Q9BSE2 394 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 TRIM54Q9BYV2 358 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 WWP1Q9H0M0 922 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 WASH6PQ9NQA3 447 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 ACSS2Q9NR19 701 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 KLF15Q9UIH9 416 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 HAO1Q9UJM8 370 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 VCANP13611 3396 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 SNRNP200O75643 2136 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 HEATR5BQ9P2D3 2071 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 NCF1BA6NI72 391 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 NCF1CA8MVU1 366 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 MYO1CO00159 1063 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TLR4O00206 839 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 HRO43593 1189 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 SNX2O60749 519 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 S100BP04271 92 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 ANXA5P08758 320 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 NCF1P14598 390 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 IDSP22304 550 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 EEF1DP29692 281 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 AVPR2P30518 371 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 GGT5P36269 586 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 CCR10P46092 362 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 NXPH1P58417 271 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 NAA20P61599 178 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 GALNT1Q10472 559 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 SRSF5Q13243 272 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 ZXDCQ2QGD7 858 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 C18orf21Q32NC0 220 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 ZNF528Q3MIS6 628 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 METTL2BQ6P1Q9 378 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TTC23LQ6PF05 361 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 MBOAT1Q6ZNC8 495 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 PARGQ86W56 976 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 HID1Q8IV36 788 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 KLHDC8AQ8IYD2 350 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TCAIMQ8N3R3 496 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 SPDYE1Q8NFV5 336 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 CFAP61Q8NHU2 1237 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 GPBAR1Q8TDU6 330 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TFGQ92734 400 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 INSM2Q96T92 566 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TRMOQ9BU70 441 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 PITPNM3Q9BZ71 974 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TMEM168Q9H0V1 697 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 PCTPQ9UKL6 214 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 PCOLCE2Q9UKZ9 415 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 WDR37Q9Y2I8 494 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 ASB1Q9Y576 335 aa14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 TNPO3Q9Y5L0 923 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-211ENST00000595945 A6NCN8 305 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 SCAMP1O15126 338 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 VILLO15195 856 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 RRP9O43818 475 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 SNUPNO95149 360 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 TGDSO95455 350 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 GUCA1CO95843 209 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 FAM107AO95990 144 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 HIST1H2AGP0C0S8 130 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 SLC35G4P0C7Q5 338 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 HIST1H2ADP20671 130 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 GRB7Q14451 532 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 UAP1L1Q3KQV9 507 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 PLK5Q496M5 336 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 CCSMST1Q4G0I0 132 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 ARL13AQ5H913 290 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 CFAP157Q5JU67 520 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 ANKS6Q68DC2 871 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 ABRAXAS1Q6UWZ7 409 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 LAYNQ6UX15 382 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 RPS27LQ71UM5 84 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 ARMCX6Q7L4S7 300 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 RD3Q7Z3Z2 195 aa14.36□□□□□ -0.11
SHKBP1-211ENST00000595945 PHACTR4Q8IZ21 702 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms