RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 LYPLAL1Q5VWZ2 237 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 TTC27Q6P3X3 843 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 FAM199XQ6PEV8 388 aaPredicted RBP14.21□□□□□ -0.13
FANCA-220ENST00000566409 BPHLQ86WA6 291 aaPredicted RBP14.21□□□□□ -0.13
FANCA-220ENST00000566409 AMIGO1Q86WK6 493 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 VRK3Q8IV63 474 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 PPHLN1Q8NEY8 458 aaKnown RBP14.21□□□□□ -0.13
FANCA-220ENST00000566409 CT55Q8WUE5 264 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 PEX13Q92968 403 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 MS4A14Q96JA4 679 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 RUFY1Q96T51 708 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 TWSG1Q9GZX9 223 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 KLHL25Q9H0H3 589 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 C1GALT1Q9NS00 363 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 KCND1Q9NSA2 647 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 CCDC88CQ9P219 2028 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 PRRC2CQ9Y520 2896 aaKnown RBP14.2□□□□□ -0.14
FANCA-220ENST00000566409 QSOX1O00391 747 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 PVRP15151 417 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 TCN2P20062 427 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 CDH3P22223 829 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 ARNTP27540 789 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 CSE1LP55060 971 aaKnown RBP14.2□□□□□ -0.14
FANCA-220ENST00000566409 PRAMEP78395 509 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 TRIP13Q15645 432 aaPredicted RBP14.2□□□□□ -0.14
FANCA-220ENST00000566409 DEFB109BQ30KR1 87 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 FASTKD1Q53R41 847 aaKnown RBP14.2□□□□□ -0.14
FANCA-220ENST00000566409 ZNF789Q5FWF6 425 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 C16orf46Q6P387 395 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 ZNF449Q6P9G9 518 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 C4orf22Q6V702 233 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 UNC5AQ6ZN44 842 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 GSTA5Q7RTV2 222 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 FLVCR1-AS1Q8TAF5 88 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 MAIP1Q8WWC4 291 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.2□□□□□ -0.14
FANCA-220ENST00000566409 CATSPER2Q96P56 530 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 TRAPPC9Q96Q05 1148 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 CATSPERZQ9NTU4 200 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 SPHK1Q9NYA1 384 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 ASF1AQ9Y294 204 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 PCDHGA6Q9Y5G7 932 aa14.2□□□□□ -0.14
FANCA-220ENST00000566409 PYCARD-AS1I3L0S3 204 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 MATN2O00339 956 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 CD3EAPO15446 510 aaKnown RBP14.19□□□□□ -0.14
FANCA-220ENST00000566409 HCRTR1O43613 425 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 KATNA1O75449 491 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 GPC4O75487 556 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 SCRG1O75711 98 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 MT-ND3P03897 115 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 CCNYL3P0C7X3 344 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 TPSB2P20231 275 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 MGAT1P26572 445 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 CCR10P46092 362 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 NPY2RP49146 381 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 ABRQ12979 859 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 GPS2Q13227 327 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 DNASE1L3Q13609 305 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 ERV3-1Q14264 604 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 KCNJ11Q14654 390 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 TPSAB1Q15661 275 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 TMTC4Q5T4D3 741 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 LCN10Q6JVE6 187 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 LRRC8BQ6P9F7 803 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 CYB5D1Q6P9G0 228 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 CES3Q6UWW8 571 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 ZNF517Q6ZMY9 492 aaPredicted RBP14.19□□□□□ -0.14
FANCA-220ENST00000566409 TMEM135Q86UB9 458 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 REXO1L1PQ8IX06 675 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 TBC1D21Q8IYX1 336 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 KRT222Q8N1A0 295 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 RASGEF1CQ8N431 466 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 OR1L3Q8NH93 324 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 OR5K2Q8NHB8 316 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 MFSD3Q96ES6 412 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 OR2A14Q96R47 310 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 KIFC1Q9BW19 673 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 CARD6Q9BX69 1037 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 AP1M1Q9BXS5 423 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 IL22Q9GZX6 179 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 SLC25A18Q9H1K4 315 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 P2RY12Q9H244 342 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 ADNPQ9H2P0 1102 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 SOHLH2Q9NX45 425 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 SYBUQ9NX95 663 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 ACTR10Q9NZ32 417 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 TTC7AQ9ULT0 858 aaPredicted RBP14.19□□□□□ -0.14
FANCA-220ENST00000566409 PLAGL1Q9UM63 463 aa14.19□□□□□ -0.14
FANCA-220ENST00000566409 C2orf74A8MZ97 194 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 AVILO75366 819 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 CREG1O75629 220 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 ZIC2O95409 532 aaPredicted RBP14.18□□□□□ -0.14
FANCA-220ENST00000566409 MSL3P1P0C860 447 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 SFTPCP11686 197 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 AOAHP28039 575 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 MAGEA6P43360 314 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 TERF1P54274 439 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 MC1RQ01726 317 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 HSPA14Q0VDF9 509 aa14.18□□□□□ -0.14
FANCA-220ENST00000566409 KCNAB2Q13303 367 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms