RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TMEM121Q9BTD3 319 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 OR52A5Q9H2C5 316 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 COG4Q9H9E3 785 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 NLE1Q9NVX2 485 aaPredicted RBP11.52□□□□□ -0.56
GABPB1-206ENST00000543881 ZDHHC3Q9NYG2 299 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 FARSAQ9Y285 508 aaKnown RBP11.52□□□□□ -0.56
GABPB1-206ENST00000543881 CAPN6Q9Y6Q1 641 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 ABCA12Q86UK0 2595 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 C17orf113A0A1B0GUU1 675 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 UBA6A0AVT1 1052 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 GOLGA6L9A6NEM1 432 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 MIF4GDA9UHW6 222 aaKnown RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 KRT86O43790 486 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 CEACAM4O75871 244 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 POU3F2P20265 443 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ELAVL4P26378 380 aaKnown RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ACY1Q03154 408 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 NR6A1Q15406 480 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ZRANB3Q5FWF4 1079 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 PRAMEF17Q5VTA0 474 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 C1QL3Q5VWW1 255 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 RBMXL3Q8N7X1 1067 aaKnown RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 SLC38A9Q8NBW4 561 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 PHC3Q8NDX5 983 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 FDCSPQ8NFU4 85 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 HEXDCQ8WVB3 486 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ATG4AQ8WYN0 398 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ZNF501Q96CX3 271 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 C19orf60Q96EN9 201 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 CDKN2AIPNLQ96HQ2 116 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 HES6Q96HZ4 224 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 C5orf34Q96MH7 638 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 PHF12Q96QT6 1004 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 LRRC40Q9H9A6 602 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 SLC5A6Q9Y289 635 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 COLEC10Q9Y6Z7 277 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 MROH6A6NGR9 719 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 OR51F1A6NGY5 319 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 SLC9B1P1A6NJY1 282 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 CFAP99D6REC4 459 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 BTN3A3O00478 584 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ZNF189O75820 626 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ZBTB11O95625 1053 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 AP2A1O95782 977 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 PSMA3P25788 255 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 NDUFS1P28331 727 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 PREPP48147 710 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ARL4DP49703 201 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 TUBB4BP68371 445 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 KIF5AQ12840 1032 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 TUBB2AQ13885 445 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 KRT33BQ14525 404 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 DBN1Q16643 649 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ARMC6Q6NXE6 501 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 TAS2R42Q7RTR8 314 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 BPHLQ86WA6 291 aaPredicted RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 HPS6Q86YV9 775 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 SYCE1Q8N0S2 351 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ACVR1CQ8NER5 493 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 STYXQ8WUJ0 223 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 FERD3LQ96RJ6 166 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 TUBB2BQ9BVA1 445 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 NUDT9Q9BW91 350 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 POMT2Q9UKY4 750 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 G3BP2Q9UN86 482 aaKnown RBP11.51□□□□□ -0.57
GABPB1-206ENST00000543881 BTRCQ9Y297 605 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 PRSS21Q9Y6M0 314 aa11.51□□□□□ -0.57
GABPB1-206ENST00000543881 ANKRD17O75179 2603 aaKnown RBP11.5□□□□□ -0.57
GABPB1-206ENST00000543881 BTN3A1O00481 513 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 ZNF185O15231 689 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 TMEM63AO94886 807 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 CBX6O95503 412 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 PTMAP06454 111 aaKnown RBP11.5□□□□□ -0.57
GABPB1-206ENST00000543881 CACNG1Q06432 222 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 ABRQ12979 859 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 GPS2Q13227 327 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 CCDC38Q502W7 563 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 IZUMO3Q5VZ72 239 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 LCN10Q6JVE6 187 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 CARFQ8N187 725 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 SPC24Q8NBT2 197 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 OR52E1Q8NGJ3 308 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 OR52K1Q8NGK4 314 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 ADAMTS17Q8TE56 1095 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 LCN9Q8WX39 176 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 MR1Q95460 341 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
GABPB1-206ENST00000543881 PKNOX2Q96KN3 472 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 TLR10Q9BXR5 811 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 SRMSQ9H3Y6 488 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 XKR8Q9H6D3 395 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 KCND1Q9NSA2 647 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 SOHLH2Q9NX45 425 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 HEBP2Q9Y5Z4 205 aa11.5□□□□□ -0.57
GABPB1-206ENST00000543881 CCDC162PA2VCL2 907 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 A6NL46 340 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 CPNE3O75131 537 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms