RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 OTUD3Q5T2D3 398 aaPredicted RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 LRRC66Q68CR7 880 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ASTLQ6HA08 431 aaPredicted RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 TMEM214Q6NUQ4 689 aaKnown RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 Q6ZNB5 142 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 SORCS1Q8WY21 1168 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 OVCA2Q8WZ82 227 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 AURKBQ96GD4 344 aaPredicted RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 RNF145Q96MT1 663 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ZNF558Q96NG5 402 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ZNF382Q96SR6 550 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 BEGAINQ9BUH8 593 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ANKRD60Q9BZ19 345 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 CXorf21Q9HAI6 301 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 SLC6A13Q9NSD5 602 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 COL4A6Q14031 1691 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 LOC730098B7Z3J9 87 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 H7C0S8 307 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 SH3BGRLO75368 114 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 CD247P20963 164 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 LHCGRP22888 699 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ATP13A5Q4VNC0 1218 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 FGD3Q5JSP0 725 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 TXNDC11Q6PKC3 985 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ZNF786Q8N393 782 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 BEND7Q8N7W2 519 aaPredicted RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 DCAF4L2Q8NA75 395 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 C1QTNF3Q9BXJ4 246 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ZDHHC6Q9H6R6 413 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 CARS2Q9HA77 564 aaKnown RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 MAGEE1Q9HCI5 957 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 MRPL40Q9NQ50 206 aaKnown RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 MRPL17Q9NRX2 175 aaKnown RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 AGPAT4Q9NRZ5 378 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 VAPAQ9P0L0 249 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 ACTR3BQ9P1U1 418 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 KIAA1522Q9P206 1035 aaPredicted RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 DNMT3BQ9UBC3 853 aaKnown RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 ANGPTL3Q9Y5C1 460 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 TYW5A2RUC4 315 aaKnown RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 H3BMQ9 156 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 TGM5O43548 720 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 EEDO75530 441 aaKnown RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 CXCL10P02778 98 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 UGT2B4P06133 528 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 INHBBP09529 407 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 HSD17B1P14061 328 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 ZNF7P17097 686 aaPredicted RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 WEE1P30291 646 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 HLA-FP30511 346 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 CCR2P41597 374 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 EIF2B2P49770 351 aaKnown RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 HSPA14Q0VDF9 509 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 BNIP3Q12983 259 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 LAPTM5Q13571 262 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 PLCL1Q15111 1095 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 CDKN3Q16667 212 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 AARS2Q5JTZ9 985 aaKnown RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 GPR107Q5VW38 600 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 CRTC1Q6UUV9 634 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 SERPINA13PQ6UXR4 307 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 ANKRD46Q86W74 232 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 VRK3Q8IV63 474 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 PHACTR4Q8IZ21 702 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 C10orf111Q8N326 155 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 ZNF366Q8N895 744 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 CHST14Q8NCH0 376 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 MAGEE2Q8TD90 523 aaPredicted RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 TOP1MTQ969P6 601 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 BIRC7Q96CA5 298 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 ITPKCQ96DU7 683 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 COG8Q96MW5 612 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 EFHD1Q9BUP0 239 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 BRINP2Q9C0B6 783 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 TSC22D4Q9Y3Q8 395 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 TCRBV5S2A0A599 114 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 J3QRK9 145 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 PFDN6O15212 129 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 GSNP06396 782 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 ACRV1P26436 265 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 BMXP51813 675 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 B4GALNT1Q00973 533 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 CD300CQ08708 224 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 PLEKHG6Q3KR16 790 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 FAM174BQ3ZCQ3 159 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 NIPAL1Q6NVV3 410 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 DLEU7Q6UYE1 221 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 SPATA19Q7Z5L4 167 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 ZBTB46Q86UZ6 589 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 DTWD1Q8N5C7 304 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 CHPT1Q8WUD6 406 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 FBXL8Q96CD0 374 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 TCEAL4Q96EI5 215 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 UHRF1Q96T88 793 aaPredicted RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 C2orf49Q9BVC5 232 aaPredicted RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 NUDT4Q9NZJ9 180 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 HECAQ9UBI9 543 aaPredicted RBP14.47□□□□□ -0.09
DDX55-209ENST00000542286 VPS9D1Q9Y2B5 631 aa14.47□□□□□ -0.09
DDX55-209ENST00000542286 CCL16O15467 120 aa14.46□□□□□ -0.09
DDX55-209ENST00000542286 CSF2RAP15509 400 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms