RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 OLFM1Q99784 485 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 MVB12BQ9H7P6 319 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 LATS2Q9NRM7 1088 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 COLEC10Q9Y6Z7 277 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 HEATR5BQ9P2D3 2071 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 FAM95CA0A1B0GW59 222 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 OR6C74A6NCV1 312 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 TRABD2BA6NFA1 517 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 C1QTNF9BB2RNN3 333 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 CAPN5O15484 640 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 KIF1CO43896 1103 aaKnown RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 VPS26AO75436 327 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 ACSL3O95573 720 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 MPOP05164 745 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 GSTA2P09210 222 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 C1QTNF9P0C862 333 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 MYBL2P10244 700 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 THRAP10827 490 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 NDUFS1P28331 727 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 PLOD1Q02809 727 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 ZNF460Q14592 562 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 C16orf72Q14CZ0 275 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 IRGCQ6NXR0 463 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 FOXR1Q6PIV2 292 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 FAM92BQ6ZTR7 304 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 PIWIL4Q7Z3Z4 852 aaKnown RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 GALNT7Q86SF2 657 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 SLC26A11Q86WA9 606 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 CACTIN-AS1Q8N1I8 211 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 OR4D9Q8NGE8 314 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 OR5K2Q8NHB8 316 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 UHMK1Q8TAS1 419 aaKnown RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 LCN9Q8WX39 176 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 KCNJ9Q92806 393 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 INPP5DQ92835 1189 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 ELMO2Q96JJ3 720 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 TMEM74Q96NL1 305 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 IL17FQ96PD4 163 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 FAM129AQ9BZQ8 928 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 TRIT1Q9H3H1 467 aaKnown RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.416e-10■□□□□ 8.2
VEGFA-224ENST00000523873 TRMT6Q9UJA5 497 aaKnown RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 SATB2Q9UPW6 733 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 ICKQ9UPZ9 632 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 DHRS7Q9Y394 339 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 COMMD10Q9Y6G5 202 aa12.47□□□□□ -0.41
VEGFA-224ENST00000523873 V9GYY5 206 aaPredicted RBP12.47□□□□□ -0.41
VEGFA-224ENST00000523873 SPTBP11277 2137 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 BTN3A3O00478 584 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 BTN3A1O00481 513 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 SLU7O95391 586 aaKnown RBP12.46□□□□□ -0.41
VEGFA-224ENST00000523873 POLR2CP19387 275 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-224ENST00000523873 FDXRP22570 491 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 CCKBRP32239 447 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 STX2P32856 288 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 CAPZBP47756 277 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 LIMK2P53671 638 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 SQSTM1Q13501 440 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 GRB7Q14451 532 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 FAM45BPQ6NSW5 357 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 FBXO38Q6PIJ6 1188 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-224ENST00000523873 PAQR3Q6TCH7 311 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 TBC1D21Q8IYX1 336 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 C2orf73Q8N5S3 287 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-224ENST00000523873 FAM45AQ8TCE6 357 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 CDKL2Q92772 493 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 GATA6Q92908 595 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 VPS39Q96JC1 886 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 PPM1MQ96MI6 270 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 MCMBPQ9BTE3 642 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 TMEM121BQ9BXQ6 578 aaPredicted RBP12.46□□□□□ -0.41
VEGFA-224ENST00000523873 RHOJQ9H4E5 214 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 ANKZF1Q9H8Y5 726 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 CAB39LQ9H9S4 337 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 HRASLS2Q9NWW9 162 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 TAS2R13Q9NYV9 303 aa12.46□□□□□ -0.41
VEGFA-224ENST00000523873 MTO1Q9Y2Z2 717 aaKnown RBP12.46□□□□□ -0.41
VEGFA-224ENST00000523873 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.42
VEGFA-224ENST00000523873 NCOR2Q9Y618 2525 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 MN1Q10571 1320 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-224ENST00000523873 CCDC187A0A096LP49 1063 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 OR5K3A6NET4 321 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 C1orf105O95561 183 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 C9P02748 559 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 ITIH1P19827 911 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 ATP5DP30049 168 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 ETV5P41161 510 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 SEPHS1P49903 392 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 TAS2R39P59534 338 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 GABREP78334 506 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 PDAP1Q13442 181 aaKnown RBP12.45□□□□□ -0.42
VEGFA-224ENST00000523873 CLPPQ16740 277 aaPredicted RBP12.45□□□□□ -0.42
VEGFA-224ENST00000523873 TTLL9Q3SXZ7 439 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.45□□□□□ -0.42
VEGFA-224ENST00000523873 TMEM207Q6UWW9 146 aa12.45□□□□□ -0.42
VEGFA-224ENST00000523873 UNC5DQ6UXZ4 953 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms