RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LRRC3BQ96PB8 259 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 PAIP1Q9H074 479 aaKnown RBP17.97■□□□□ 0.47
SDC2-202ENST00000518385 POLR1BQ9H9Y6 1135 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 TRPV4Q9HBA0 871 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 SPHK2Q9NRA0 654 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 BLOC1S6Q9UL45 172 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 AP3M1Q9Y2T2 418 aa17.97■□□□□ 0.47
SDC2-202ENST00000518385 TCRBV5S2A0A599 114 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 SYCE1LA8MT33 242 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 FXYD1O00168 92 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 SEC14L2O76054 403 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 ALBP02768 609 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 ALDOCP09972 364 aaKnown RBP17.96■□□□□ 0.47
SDC2-202ENST00000518385 PABPC1P11940 636 aaKnown RBP17.96■□□□□ 0.47
SDC2-202ENST00000518385 RPS3P23396 243 aaKnown RBP eCLIP17.96■□□□□ 0.472e-7■■■■□ 21.8
SDC2-202ENST00000518385 FMO4P31512 558 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 STT3AP46977 705 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 CDH15P55291 814 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 KCNK10P57789 538 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 PPP1R3AQ16821 1122 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 PTPRNQ16849 979 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 DGKKQ5KSL6 1271 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 GRAMD4Q6IC98 578 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 CES5AQ6NT32 575 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 KIAA0907Q7Z7F0 614 aaPredicted RBP17.96■□□□□ 0.47
SDC2-202ENST00000518385 RETREG3Q86VR2 466 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 PHYKPLQ8IUZ5 450 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 GRIN3AQ8TCU5 1115 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 TMEM125Q96AQ2 219 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 RSPRY1Q96DX4 576 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 BBS2Q9BXC9 721 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 ALG9Q9H6U8 611 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 CYP4F12Q9HCS2 524 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 CMTM6Q9NX76 183 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 OBP2AQ9NY56 170 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 ZIM2Q9NZV7 527 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 MAGEL2Q9UJ55 1249 aa17.96■□□□□ 0.47
SDC2-202ENST00000518385 COLQQ9Y215 455 aaPredicted RBP17.96■□□□□ 0.47
SDC2-202ENST00000518385 PRRC2BQ5JSZ5 2229 aaKnown RBP17.96■□□□□ 0.47
SDC2-202ENST00000518385 NEMP2A6NFY4 417 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 H3BMM5 538 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 OCM2P0CE71 109 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 OCMP0CE72 109 aaPredicted RBP17.96■□□□□ 0.46
SDC2-202ENST00000518385 PRR35P0CG20 571 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 KCNA5P22460 613 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 VIPR2P41587 438 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 GPR33Q49SQ1 333 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 CYBRD1Q53TN4 286 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 CARD16Q5EG05 197 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 ZDHHC20Q5W0Z9 365 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 C22orf39Q6P5X5 142 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 ISLR2Q6UXK2 745 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 CYHR1Q6ZMK1 362 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 DCDC5Q6ZRR9 648 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 KCTD8Q6ZWB6 473 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 GET4Q7L5D6 327 aaPredicted RBP17.96■□□□□ 0.46
SDC2-202ENST00000518385 SNX20Q7Z614 316 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 PIM3Q86V86 326 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 SPPL2CQ8IUH8 684 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 TWIST2Q8WVJ9 160 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 CYGBQ8WWM9 190 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 ECHDC3Q96DC8 303 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 KCTD14Q9BQ13 255 aaPredicted RBP17.96■□□□□ 0.46
SDC2-202ENST00000518385 C1QTNF3Q9BXJ4 246 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 LIN28AQ9H9Z2 209 aaKnown RBP17.96■□□□□ 0.46
SDC2-202ENST00000518385 OAZ3Q9UMX2 235 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 COQ6Q9Y2Z9 468 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 FIS1Q9Y3D6 152 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 WNT6Q9Y6F9 365 aa17.96■□□□□ 0.46
SDC2-202ENST00000518385 KPNA4O00629 521 aaPredicted RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 PRMT5O14744 637 aaPredicted RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 KERAO60938 352 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 ATP6V1G1O75348 118 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 DEAF1O75398 565 aaPredicted RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 ATE1O95260 518 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 BCL10O95999 233 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 CHEK2O96017 543 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 EIF2S1P05198 315 aaKnown RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 ENO2P09104 434 aaPredicted RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 CDH1P12830 882 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 ZNF7P17097 686 aaPredicted RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 ITGALP20701 1170 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 ECT2LQ008S8 904 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 DLX2Q07687 328 aaPredicted RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 PMS2P3Q13401 168 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 RCAN2Q14206 197 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 COL19A1Q14993 1142 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 CDKN3Q16667 212 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 CYP51A1Q16850 503 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 FUT11Q495W5 492 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 TTC23Q5W5X9 447 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 PSAPL1Q6NUJ1 521 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 C16orf87Q6PH81 154 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 TXNDC11Q6PKC3 985 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 LAYNQ6UX15 382 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 PIANPQ8IYJ0 282 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 PAF1Q8N7H5 531 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 SNX31Q8N9S9 440 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 BPIFB1Q8TDL5 484 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 SCRN2Q96FV2 425 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms