RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 STAMBPL1Q96FJ0 436 aa7.03□□□□□ -1.28
NUP54-215ENST00000514313 BTBD10Q9BSF8 475 aa7.03□□□□□ -1.28
NUP54-215ENST00000514313 UTP14AQ9BVJ6 771 aaKnown RBP7.03□□□□□ -1.28
NUP54-215ENST00000514313 GTPBP2Q9BX10 602 aaKnown RBP7.03□□□□□ -1.28
NUP54-215ENST00000514313 LMAN1LQ9HAT1 526 aa7.03□□□□□ -1.28
NUP54-215ENST00000514313 ABCB8Q9NUT2 735 aa7.03□□□□□ -1.28
NUP54-215ENST00000514313 TTC3P53804 2025 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 FAM90A10PA6NDY2 464 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 OOEPA6NGQ2 149 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 C15orf62A8K5M9 175 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 SLC30A4O14863 429 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 ZNHIT1O43257 154 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 WDR1O75083 606 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 PMS2P2O95744 297 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 CSN3P07498 182 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 KRT19P08727 400 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 PLA2G4BP0C869 781 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 ACP2P11117 423 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 GNL1P36915 607 aaPredicted RBP7.02□□□□□ -1.29
NUP54-215ENST00000514313 WNT5AP41221 380 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 ALDH3A2P51648 485 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 RELQ04864 619 aaPredicted RBP7.02□□□□□ -1.29
NUP54-215ENST00000514313 RCN2Q14257 317 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 ENPP7Q6UWV6 458 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 DZIP1Q86YF9 867 aaKnown RBP7.02□□□□□ -1.29
NUP54-215ENST00000514313 C10orf53Q8N6V4 93 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 MIB2Q96AX9 1013 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 PARK7Q99497 189 aaKnown RBP7.02□□□□□ -1.29
NUP54-215ENST00000514313 CSTL1Q9H114 145 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 ADPRHL2Q9NX46 363 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 ITGA11Q9UKX5 1188 aa7.02□□□□□ -1.29
NUP54-215ENST00000514313 IGLV5-37A0A075B6J1 123 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 TEX13DA0A0J9YY54 714 aaPredicted RBP7.01□□□□□ -1.29
NUP54-215ENST00000514313 C5orf60A6NFR6 353 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ZNF587BE7ETH6 402 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ZNF263O14978 683 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ST8SIA3O43173 380 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ZNF12P17014 697 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 AP1B1Q10567 949 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ITGA7Q13683 1181 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 TWISTNBQ3B726 338 aaPredicted RBP7.01□□□□□ -1.29
NUP54-215ENST00000514313 OR7E24Q6IFN5 339 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 TRNP1Q6NT89 227 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 C15orf39Q6ZRI6 1047 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ASB18Q6ZVZ8 466 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 SATL1Q86VE3 508 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 PTOV1Q86YD1 416 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ARHGAP24Q8N264 748 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ARL10Q8N8L6 244 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 UXS1Q8NBZ7 420 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 SSMEM1Q8WWF3 244 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 RAD54LQ92698 747 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 KRT35Q92764 455 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 CABS1Q96KC9 395 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 SLX1AQ9BQ83 275 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 ACKR4Q9NPB9 350 aa7.01□□□□□ -1.29
NUP54-215ENST00000514313 A0A0G2JPF8 293 aa7□□□□□ -1.29
NUP54-215ENST00000514313 SRRM3A6NNA2 597 aaPredicted RBP7□□□□□ -1.29
NUP54-215ENST00000514313 HNRNPCL3B7ZW38 293 aa7□□□□□ -1.29
NUP54-215ENST00000514313 SELENOFO60613 162 aa7□□□□□ -1.29
NUP54-215ENST00000514313 WDPCPO95876 746 aa7□□□□□ -1.29
NUP54-215ENST00000514313 IGHV2-70P01814 119 aa7□□□□□ -1.29
NUP54-215ENST00000514313 CRYABP02511 175 aaKnown RBP7□□□□□ -1.29
NUP54-215ENST00000514313 RLN1P04808 185 aa7□□□□□ -1.29
NUP54-215ENST00000514313 PRSS2P07478 247 aa7□□□□□ -1.29
NUP54-215ENST00000514313 HNRNPCL4P0DMR1 293 aa7□□□□□ -1.29
NUP54-215ENST00000514313 EEF2P13639 858 aaKnown RBP7□□□□□ -1.29
NUP54-215ENST00000514313 HLA-DOBP13765 273 aa7□□□□□ -1.29
NUP54-215ENST00000514313 TIA1P31483 386 aaKnown RBP eCLIP7□□□□□ -1.29
NUP54-215ENST00000514313 USP8P40818 1118 aa7□□□□□ -1.29
NUP54-215ENST00000514313 GMPSP49915 693 aaPredicted RBP7□□□□□ -1.29
NUP54-215ENST00000514313 MAT1AQ00266 395 aaKnown RBP7□□□□□ -1.29
NUP54-215ENST00000514313 TRAF2Q12933 501 aa7□□□□□ -1.29
NUP54-215ENST00000514313 CUL3Q13618 768 aa7□□□□□ -1.29
NUP54-215ENST00000514313 GTF2H2Q13888 395 aa7□□□□□ -1.29
NUP54-215ENST00000514313 MORF4L2Q15014 288 aa7□□□□□ -1.29
NUP54-215ENST00000514313 TAZQ16635 292 aa7□□□□□ -1.29
NUP54-215ENST00000514313 NDUFAF5Q5TEU4 345 aa7□□□□□ -1.29
NUP54-215ENST00000514313 GTF2H2CQ6P1K8 395 aa7□□□□□ -1.29
NUP54-215ENST00000514313 PLXDC2Q6UX71 529 aa7□□□□□ -1.29
NUP54-215ENST00000514313 PLEKHM3Q6ZWE6 761 aa7□□□□□ -1.29
NUP54-215ENST00000514313 ARHGAP22Q7Z5H3 698 aa7□□□□□ -1.29
NUP54-215ENST00000514313 DBF4BQ8NFT6 615 aa7□□□□□ -1.29
NUP54-215ENST00000514313 NEURL2Q9BR09 285 aa7□□□□□ -1.29
NUP54-215ENST00000514313 MINDY3Q9H8M7 445 aa7□□□□□ -1.29
NUP54-215ENST00000514313 MRPL44Q9H9J2 332 aaKnown RBP7□□□□□ -1.29
NUP54-215ENST00000514313 CDH20Q9HBT6 801 aa7□□□□□ -1.29
NUP54-215ENST00000514313 TRPC7Q9HCX4 862 aa7□□□□□ -1.29
NUP54-215ENST00000514313 TUFT1Q9NNX1 390 aa7□□□□□ -1.29
NUP54-215ENST00000514313 DNAJC4Q9NNZ3 241 aa7□□□□□ -1.29
NUP54-215ENST00000514313 CNIH4Q9P003 139 aa7□□□□□ -1.29
NUP54-215ENST00000514313 PCDHA7Q9UN72 937 aa7□□□□□ -1.29
NUP54-215ENST00000514313 DLGAP4Q9Y2H0 992 aa7□□□□□ -1.29
NUP54-215ENST00000514313 MED19A0JLT2 244 aaPredicted RBP6.99□□□□□ -1.29
NUP54-215ENST00000514313 CLEC18AA5D8T8 446 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 LIPFP07098 398 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 H1F0P07305 194 aaKnown RBP6.99□□□□□ -1.29
NUP54-215ENST00000514313 SMIM18P0DKX4 95 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CSF2RAP15509 400 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 GM2AP17900 193 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms