RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 VRK3Q8IV63 474 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 PPM1NQ8N819 430 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 GPATCH11Q8N954 259 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 SIDT2Q8NBJ9 832 aaKnown RBP14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 AENQ8WTP8 325 aaKnown RBP14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 INPP5DQ92835 1189 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 GPR21Q99679 349 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 SLC30A3Q99726 388 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 CCDC3Q9BQI4 270 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 EPB41L4BQ9H329 900 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 EPB41L1Q9H4G0 881 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 KIR3DX1Q9H7L2 352 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 MVB12BQ9H7P6 319 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 POPDC3Q9HBV1 291 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 GALPQ9UBC7 116 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 TRMT6Q9UJA5 497 aaKnown RBP14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 VWA7Q9Y334 891 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 COLEC10Q9Y6Z7 277 aa14.57□□□□□ -0.08
CDC42SE1-203ENST00000470278 RP1P56715 2156 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 SPRP35270 261 aaPredicted RBP14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 MAPK9P45984 424 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 GPLD1P80108 840 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 POU4F1Q01851 419 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 CAMK2BQ13554 666 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 GPR18Q14330 331 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 BRD3Q15059 726 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 PIM3Q86V86 326 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 TBC1D21Q8IYX1 336 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 CNPY4Q8N129 248 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 OR5K2Q8NHB8 316 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 MDM1Q8TC05 714 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 SLC44A1Q8WWI5 657 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 TFGQ92734 400 aaPredicted RBP14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 CAVIN3Q969G5 261 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 FAM136AQ96C01 138 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 ATXN7L3BQ96GX2 97 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 SLC38A3Q99624 504 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 OLFM1Q99784 485 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 PARD6BQ9BYG5 372 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 FETUBQ9UGM5 382 aa14.56□□□□□ -0.08
CDC42SE1-203ENST00000470278 TRBV23OR9-2A0A075B6M9 112 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 NTN3O00634 580 aaPredicted RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 TCEA3O75764 348 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 MATN4O95460 622 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 RPN2P04844 631 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ITGA2BP08514 1039 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ZNF37AP17032 561 aaPredicted RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 PDAP1Q13442 181 aaKnown RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 SQSTM1Q13501 440 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ZKSCAN8Q15776 578 aaPredicted RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ACSBG2Q5FVE4 666 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 DUS1LQ6P1R4 473 aaKnown RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 C19orf48Q6RUI8 117 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ACVR1CQ8NER5 493 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ELMO2Q96JJ3 720 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 BBC3Q96PG8 261 aaPredicted RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 TRIT1Q9H3H1 467 aaKnown RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 POLG2Q9UHN1 485 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 SLC24A2Q9UI40 661 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ZNF180Q9UJW8 692 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 ASF1AQ9Y294 204 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 CFAP20Q9Y6A4 193 aaKnown RBP14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 TENM4Q6N022 2769 aa14.55□□□□□ -0.08
CDC42SE1-203ENST00000470278 FLNBO75369 2602 aaKnown RBP14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 ASH1LQ9NR48 2969 aaKnown RBP14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 IGHV1OR21-1A0A087WYE8 117 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 EXOC1LA0A1B0GW35 172 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 OPA1O60313 960 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 WISP3O95389 354 aaPredicted RBP14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 TSPAN12O95859 305 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 RPLP0P05388 317 aaKnown RBP14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 MPC1LP0DKB6 136 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 RGS4P49798 205 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 TAS2R39P59534 338 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 SLC29A2Q14542 456 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 SOWAHCQ53LP3 525 aaPredicted RBP14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 TMPRSS7Q7RTY8 843 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 RASGRP3Q8IV61 690 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 DCUN1D3Q8IWE4 304 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 CPNE9Q8IYJ1 553 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 CACTIN-AS1Q8N1I8 211 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 TSPAN17Q96FV3 270 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 FOPNLQ96NB1 174 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 PAFAH2Q99487 392 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 DHRS4Q9BTZ2 278 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 KCNK4Q9NYG8 393 aa14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 MTO1Q9Y2Z2 717 aaKnown RBP14.54□□□□□ -0.08
CDC42SE1-203ENST00000470278 PRAMEF33A0A0G2JMD5 474 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 A0A1W2PQM1 296 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 D6RAR5 112 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 B4GAT1O43505 415 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 DUX1O43812 170 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 PSIP1O75475 530 aaKnown RBP14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 FAM155BO75949 473 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 INHBAP08476 426 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 CNTFP26441 200 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 CCNFP41002 786 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 SERPINB9P50453 376 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 OR1D5P58170 312 aa14.53□□□□□ -0.08
CDC42SE1-203ENST00000470278 INSM1Q01101 510 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms