RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ZNF789Q5FWF6 425 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 SPANXN3Q5MJ09 141 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 TMEM164Q5U3C3 297 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 OTOAQ7RTW8 1153 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 ZNF572Q7Z3I7 529 aaPredicted RBP12.54□□□□□ -0.4
COL5A1-206ENST00000465877 LMNTD2Q8IXW0 634 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 UNC5BQ8IZJ1 945 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 PHC3Q8NDX5 983 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 CALML6Q8TD86 181 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 LCN9Q8WX39 176 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 FAM136AQ96C01 138 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 CFAP36Q96G28 342 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 PWWP2AQ96N64 755 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 TAAR9Q96RI9 348 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 NRTNQ99748 197 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 FAM167BQ9BTA0 163 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 NAT9Q9BTE0 207 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 B3GNT4Q9C0J1 378 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 SRMSQ9H3Y6 488 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 TFB2MQ9H5Q4 396 aaKnown RBP12.54□□□□□ -0.4
COL5A1-206ENST00000465877 SLC39A1Q9NY26 324 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
COL5A1-206ENST00000465877 POMT2Q9UKY4 750 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 PCDHGA3Q9Y5H0 932 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 B3GALT1Q9Y5Z6 326 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 FAM169AQ9Y6X4 670 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 IGSF10Q6WRI0 2623 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 IGHV5-51A0A0C4DH38 117 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 GSAPA4D1B5 854 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 OR6C74A6NCV1 312 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 FAM187AA6NFU0 413 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 E5RI56 91 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 H3BMM5 538 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 KPNA5O15131 536 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 SLCO2B1O94956 709 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 RPN2P04844 631 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 PKMP14618 531 aaKnown RBP12.53□□□□□ -0.4
COL5A1-206ENST00000465877 POLR2CP19387 275 aaPredicted RBP12.53□□□□□ -0.4
COL5A1-206ENST00000465877 SHMT2P34897 504 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 ARL4CP56559 192 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 MPP1Q00013 466 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 MC2RQ01718 297 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 CKAP4Q07065 602 aaKnown RBP12.53□□□□□ -0.4
COL5A1-206ENST00000465877 PLEKHS1Q5SXH7 462 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 ANKS6Q68DC2 871 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 ARMC6Q6NXE6 501 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 C19orf48Q6RUI8 117 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 UNC5DQ6UXZ4 953 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 CEACAM20Q6UY09 585 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 MAATS1Q7Z4T9 603 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 IGDCC3Q8IVU1 814 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 DCUN1D3Q8IWE4 304 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 TBC1D21Q8IYX1 336 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 OR4E2Q8NGC2 313 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
COL5A1-206ENST00000465877 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 UBXN4Q92575 508 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 LRRC39Q96DD0 335 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 CERS2Q96G23 380 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 CRELD1Q96HD1 420 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 MAP3K3Q99759 626 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 ERP44Q9BS26 406 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 ASPSCR1Q9BZE9 553 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 DPH1Q9BZG8 443 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 PLAC1Q9HBJ0 212 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 APMAPQ9HDC9 416 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 IARS2Q9NSE4 1012 aaKnown RBP12.53□□□□□ -0.4
COL5A1-206ENST00000465877 SEMA5BQ9P283 1151 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
COL5A1-206ENST00000465877 SNX24Q9Y343 169 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 TEX264Q9Y6I9 313 aa12.53□□□□□ -0.4
COL5A1-206ENST00000465877 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 STMND1H3BQB6 276 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 BTN3A3O00478 584 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 KLK10O43240 276 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 KDM1AO60341 852 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 S1PR4O95977 384 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 NELFEP18615 380 aaKnown RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 ELK3P41970 407 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 KPNA2P52292 529 aaKnown RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 SH3BP2P78314 561 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 FOXM1Q08050 763 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 GBX1Q14549 363 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 FASTKD3Q14CZ7 662 aaKnown RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 DCAF12Q5T6F0 453 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 UNC5AQ6ZN44 842 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 AMIGO1Q86WK6 493 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 ZFAND4Q86XD8 727 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 CNTN4Q8IWV2 1026 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 BBOF1Q8ND07 529 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 GSDMBQ8TAX9 411 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 TEFMQ96QE5 360 aaKnown RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 CTRCQ99895 268 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 CCDC68Q9H2F9 335 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 XKR8Q9H6D3 395 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 FBXO8Q9NRD0 319 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms