RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 TRABDQ9H4I3 376 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 TFB2MQ9H5Q4 396 aaKnown RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 NDOR1Q9UHB4 597 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 HEY1Q9Y5J3 304 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 AP1M2Q9Y6Q5 423 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 PCDH17O14917 1159 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 MSH3P20585 1137 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 KDELR1P24390 212 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 HTR1EP28566 365 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 AKT1P31749 480 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 GCGRP47871 477 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 KRTAP10-9P60411 292 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 ITGA9Q13797 1035 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 NKAIN1Q4KMZ8 207 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 ZNF658BQ4V348 819 aaPredicted RBP16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 AGAP7PQ5VUJ5 663 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 SLC9A4Q6AI14 798 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 MAP7D3Q8IWC1 876 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 PARP9Q8IXQ6 854 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 NXPE1Q8N323 547 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 C19orf47Q8N9M1 422 aaKnown RBP16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 POM121Q96HA1 1249 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 CCDC120Q96HB5 630 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 AGAP4Q96P64 663 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 AP1M1Q9BXS5 423 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 XKR8Q9H6D3 395 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 OLAHQ9NV23 265 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 ACTR10Q9NZ32 417 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 HEBP2Q9Y5Z4 205 aa16.58■□□□□ 0.24
UBE2D4-209ENST00000454428 KLHL33A6NCF5 533 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 C3orf70A6NLC5 250 aaPredicted RBP16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 PROSCO94903 275 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 CD63P08962 238 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 MMP11P24347 488 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 WNT3AP56704 352 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 Q0VFX4 171 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 KRT33BQ14525 404 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 TLR1Q15399 786 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 TEX44Q53QW1 395 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 CCDC70Q6NSX1 233 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 RPUSD3Q6P087 351 aaKnown RBP16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 SPESP1Q6UW49 350 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 FAM180AQ6UWF9 173 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 SPNS3Q6ZMD2 512 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 GLT6D1Q7Z4J2 308 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 SLC25A41Q8N5S1 370 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 BCORP1Q8N888 145 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 PHC3Q8NDX5 983 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 FLVCR1-AS1Q8TAF5 88 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 ZNF398Q8TD17 642 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 MRGPRX2Q96LB1 330 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 TAAR6Q96RI8 345 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 FERD3LQ96RJ6 166 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 OR52A5Q9H2C5 316 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 HS3ST3B1Q9Y662 390 aa16.57■□□□□ 0.24
UBE2D4-209ENST00000454428 A0A0A6YYK5 440 aaPredicted RBP16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 C2orf74A8MZ97 194 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 ZSCAN9O15535 394 aaPredicted RBP16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 MAP3K7O43318 606 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 KLHL18O94889 574 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 PRAMEF1O95521 474 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 PTPN3P26045 913 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 TMPRSS15P98073 1019 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 FCRL6Q6DN72 434 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 KIRREL2Q6UWL6 708 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 MRGPRGQ86SM5 289 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 AMIGO1Q86WK6 493 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 ZNF655Q8N720 491 aaPredicted RBP16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 BLOC1S5Q8TDH9 187 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 NACC2Q96BF6 587 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 RBM41Q96IZ5 413 aaKnown RBP16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 TEKT5Q96M29 485 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 MESP1Q9BRJ9 268 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 CCM2Q9BSQ5 444 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 CHRNA10Q9GZZ6 450 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 NAV3Q8IVL0 2385 aa16.56■□□□□ 0.24
UBE2D4-209ENST00000454428 NCOA6Q14686 2063 aaPredicted RBP16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 A0A087X0T9 212 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 FAM228BP0C875 321 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 PYGMP11217 842 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 COX6B1P14854 86 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 UGT2B7P16662 529 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 PDHA2P29803 388 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 PRLHRP49683 370 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 PDK1Q15118 436 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 ZNF808Q8N4W9 903 aaPredicted RBP16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 HM13Q8TCT9 377 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 OXNAD1Q96HP4 312 aaPredicted RBP16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 OR2A14Q96R47 310 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 SPSB2Q99619 263 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 LHPPQ9H008 270 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 CHST11Q9NPF2 352 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 FAM153AQ9UHL3 310 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 ICKQ9UPZ9 632 aa16.55■□□□□ 0.24
UBE2D4-209ENST00000454428 AGAP14A8MT82 685 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 ZNF487B1APH4 448 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 EPOP01588 193 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 WASHC5Q12768 1159 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms