RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CFAP77Q6ZQR2 320 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 C1QL2Q7Z5L3 287 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 IRF2BP2Q7Z5L9 587 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF575Q86XF7 245 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 OR8H2Q8N162 312 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 LRRC43Q8N309 656 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 SPATA6LQ8N4H0 392 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 RNF10Q8N5U6 811 aaKnown RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 PPFIBP2Q8ND30 876 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 WASF1Q92558 559 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ERP27Q96DN0 273 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 SAT2Q96F10 170 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 CHMP6Q96FZ7 201 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF274Q96GC6 653 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 NAF1Q96HR8 494 aaKnown RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 CAPZA3Q96KX2 299 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZIM3Q96PE6 472 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 SERINC2Q96SA4 455 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ACOX2Q99424 681 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 NUP58Q9BVL2 599 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 TEX12Q9BXU0 123 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 DCLK3Q9C098 648 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM234AQ9H0X4 552 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 PPP1R3EQ9H7J1 279 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 IL1RAPL2Q9NP60 686 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 LTB4R2Q9NPC1 389 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 RMND1Q9NWS8 449 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 NENFQ9UMX5 172 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 GUCA1BQ9UMX6 200 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF148Q9UQR1 794 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 R3HDM2Q9Y2K5 976 aaKnown RBP4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 SQORQ9Y6N5 450 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 TIAM2Q8IVF5 1701 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 NEDD4P46934 1319 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 WDR19Q8NEZ3 1342 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARFGEF2Q9Y6D5 1785 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 PALLDQ8WX93 1383 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 PLEKHG1Q9ULL1 1385 aa4.4□□□□□ -1.71
HMGB1P16-201ENST00000447155 SCN4AP35499 1836 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATAD5Q96QE3 1844 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 BCL9O00512 1426 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CRB1P82279 1406 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARHGAP23Q9P227 1491 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 PEAK1Q9H792 1746 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 C1orf226A1L170 272 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCT8L1PA6NM43 557 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CETN3O15182 167 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 DIAPH2O60879 1101 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 PFDN1O60925 122 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ATP6V1G1O75348 118 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 GPC4O75487 556 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TPPPO94811 219 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 PGM3O95394 542 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TOMM40O96008 361 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZFYP08048 801 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 IDO1P14902 403 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 NQO1P15559 274 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 PRLRP16471 622 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 EIF2S2P20042 333 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 PON1P27169 355 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 EIF2DP41214 584 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 PRCPP42785 496 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLC15A1P46059 708 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ACADVLP49748 655 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 MFAP4P55083 255 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 C2orf54Q08AI8 447 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 AIMP1Q12904 312 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZBTB17Q13105 803 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 MFSD4BQ5TF39 518 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 RESP18Q5W5W9 173 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 KLC3Q6P597 504 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 B3GNT6Q6ZMB0 384 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 INTS8Q75QN2 995 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TAOK1Q7L7X3 1001 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TECPR1Q7Z6L1 1165 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TSPAN33Q86UF1 283 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZC3HC1Q86WB0 502 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 DSELQ8IZU8 1212 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 LSMEM1Q8N8F7 131 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 HJURPQ8NCD3 748 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 KIFAP3Q92845 792 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CENPTQ96BT3 561 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 MOAP1Q96BY2 351 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF778Q96MU6 729 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZMAT2Q96NC0 199 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 HAUS8Q9BT25 410 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM129AQ9BZQ8 928 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 RAB17Q9H0T7 212 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 IL25Q9H293 177 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 KCNN2Q9H2S1 579 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 RABEP2Q9H5N1 569 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 WDR26Q9H7D7 661 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 PPANQ9NQ55 473 aaKnown RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CNGB3Q9NQW8 809 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 HIF1ANQ9NWT6 349 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 WDR35Q9P2L0 1181 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 UBA2Q9UBT2 640 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 CHORDC1Q9UHD1 332 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 FBXW11Q9UKB1 542 aa4.39□□□□□ -1.71
HMGB1P16-201ENST00000447155 TTC7AQ9ULT0 858 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms