RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FKBP9P1Q75LS8 142 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MIGA2Q7L4E1 593 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 POLNQ7Z5Q5 900 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 LDLRAD3Q86YD5 345 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 C2CD5Q86YS7 1000 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SLC13A5Q86YT5 568 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ARHGAP24Q8N264 748 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TRAM1L1Q8N609 369 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 C12orf29Q8N999 325 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ATG16L2Q8NAA4 619 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CHST14Q8NCH0 376 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 OR6Q1Q8NGQ2 317 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 RP9Q8TA86 221 aaKnown RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MITD1Q8WV92 249 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TSEN15Q8WW01 171 aaKnown RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 NEU4Q8WWR8 484 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 GAB3Q8WWW8 586 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 BRI3BPQ8WY22 251 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PROX1Q92786 737 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MR1Q95460 341 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MUL1Q969V5 352 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ERLEC1Q96DZ1 483 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PGAP3Q96FM1 320 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SIPA1Q96FS4 1042 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 APOPT1Q96IL0 206 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF479Q96JC4 524 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZFYVE19Q96K21 471 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF514Q96K75 400 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 KLHL5Q96PQ7 755 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SEC22CQ9BRL7 303 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TMEM175Q9BSA9 504 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CNPY3Q9BT09 278 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZSCAN5AQ9BUG6 496 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 PLA2G12BQ9BX93 195 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ANKRD2Q9GZV1 360 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 OR52A5Q9H2C5 316 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 VIPAS39Q9H9C1 493 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CAB39LQ9H9S4 337 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 S100A14Q9HCY8 104 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 KLHL1Q9NR64 748 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 NDE1Q9NXR1 346 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CYP39A1Q9NYL5 469 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 NKIRAS1Q9NYS0 192 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SMARCAL1Q9NZC9 954 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 SCOCQ9UIL1 159 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF229Q9UJW7 825 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 CHKBQ9Y259 395 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 NCKAP1Q9Y2A7 1128 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 TBC1D30Q9Y2I9 924 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 MYOM1P52179 1685 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 ADGRF5Q8IZF2 1346 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 EFCAB6Q5THR3 1501 aa4.66□□□□□ -1.66
HMGB3P9-201ENST00000441799 A0A087X1B8 175 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 A0A0J9YYE9 177 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 CFAP73A6NFT4 308 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 KCNQ3O43525 872 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 TSPAN2O60636 221 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 PRDM1O75626 825 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 CCNKO75909 580 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 OAZ2O95190 189 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 VNN2O95498 520 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 MBD3O95983 291 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 PDGFBP01127 241 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 TRBC1P01850 177 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 IGHEP01854 428 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 KRT8P05787 483 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 CSF1P09603 554 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 IQCF3P0C7M6 154 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 ZNF12P17014 697 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 KRT15P19012 456 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 TNNI1P19237 187 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 TNNI3P19429 210 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 ITGALP20701 1170 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 TCEA1P23193 301 aaKnown RBP4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 CMA1P23946 247 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 CTSSP25774 331 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 PTPN6P29350 595 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 GRK3P35626 688 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 SERPINB5P36952 375 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 CD79BP40259 229 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 EIF2DP41214 584 aaKnown RBP4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 ALDH9A1P49189 494 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 MTHFSP49914 203 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 TOB1P50616 345 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 NDST2P52849 883 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 NAGLUP54802 743 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 NANOS3P60323 173 aaKnown RBP4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 PRPS1P60891 318 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 SPIBQ01892 262 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 ABRQ12979 859 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 STX5Q13190 355 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 NFYCQ13952 458 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 PON3Q15166 354 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 ANGPT1Q15389 498 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 NTRK3Q16288 839 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 SLC5A12Q1EHB4 618 aa4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 EIF2S3LQ2VIR3 472 aaKnown RBP4.65□□□□□ -1.67
HMGB3P9-201ENST00000441799 EDRF1Q3B7T1 1238 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms