RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PDE1BQ01064 536 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 IKQ13123 557 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 TAF12Q16514 161 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 FAM72AQ5TYM5 149 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 FAM72DQ6L9T8 149 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 TRNP1Q6NT89 227 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 METTL2BQ6P1Q9 378 aaKnown RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 MTERF4Q7Z6M4 381 aaKnown RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 TMCO2Q7Z6W1 182 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 FAM72BQ86X60 149 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 ERC1Q8IUD2 1116 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 EPHX4Q8IUS5 362 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 MYOCDQ8IZQ8 938 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 C1orf87Q8N0U7 546 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 ANKRD42Q8N9B4 389 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 GMCL1P1Q8NEA9 526 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 ZCCHC10Q8TBK6 192 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 SCFD2Q8WU76 684 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 TOP1MTQ969P6 601 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 METTL2AQ96IZ6 378 aaKnown RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 FSD1Q9BTV5 496 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 GPR63Q9BZJ6 419 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 TKTL2Q9H0I9 626 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 PLEKHA4Q9H4M7 779 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 PPP1R3EQ9H7J1 279 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 MMP25Q9NPA2 562 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 SCRT2Q9NQ03 307 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 HINT3Q9NQE9 182 aaKnown RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 CYP39A1Q9NYL5 469 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 SLC25A10Q9UBX3 287 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 TCF19Q9Y242 345 aa4.68□□□□□ -1.66
HMGB3P5-201ENST00000428894 DNAH14Q0VDD8 3507 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 PLXNA3P51805 1871 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 CACNA1GO43497 2377 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 FSD2A1L4K1 749 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 LOC730098B7Z3J9 87 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 C5orf67F2Z3F1 127 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 SEC14L5O43304 696 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 TPD52L2O43399 206 aaKnown RBP4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 BDKRB2P30411 391 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 TIMP3P35625 211 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 CDKN1AP38936 164 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 SLC1A4P43007 532 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 LINC01547P58512 204 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 PITX1P78337 314 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 FOXD4Q12950 439 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 GPNMBQ14956 572 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 SBK1Q52WX2 424 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 ZSCAN25Q6NSZ9 544 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 ASCL5Q7RTU5 278 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 DGLUCYQ7Z3D6 616 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 NFE4Q86UQ8 179 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 LRRTM4Q86VH4 590 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 ADSSL1Q8N142 457 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 OR2AK2Q8NG84 335 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 SEPT8Q92599 483 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 MAELQ96JY0 434 aaKnown RBP4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 KLHL15Q96M94 604 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 MTERF1Q99551 399 aaKnown RBP4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 CMKLR1Q99788 373 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 SH3GL2Q99962 352 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 FUZQ9BT04 418 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 H2AFJQ9BTM1 129 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 ISY1Q9ULR0 285 aaKnown RBP4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 A4GNTQ9UNA3 340 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 LOXL2Q9Y4K0 774 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 WDR87Q6ZQQ6 2873 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 MYH7BA7E2Y1 1941 aa4.67□□□□□ -1.66
HMGB3P5-201ENST00000428894 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 RSPH10B2B2RC85 870 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 PRKAB2O43741 272 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 ZNF500O60304 480 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 LETM1O95202 739 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 MBD4O95243 580 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 AMBPP02760 352 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 RSPH10BP0C881 870 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 MYOD1P15172 320 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 ICAM3P32942 547 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 GGT5P36269 586 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 GABRB2P47870 512 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 VCPP55072 806 aaKnown RBP4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 NAE1Q13564 534 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 CAMK1Q14012 370 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 BAATQ14032 418 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 CCDC6Q16204 474 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 GGNBP1Q5YKI7 109 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 HIST2H2BCQ6DN03 193 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 HIST2H2BDQ6DRA6 164 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 PLEKHA7Q6IQ23 1121 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 CTR9Q6PD62 1173 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 AACSQ86V21 672 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 UBALD2Q8IYN6 164 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 DBF4BQ8NFT6 615 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 APBB2Q92870 758 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 ZBTB10Q96DT7 871 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 MAF1Q9H063 256 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 CCPG1Q9ULG6 757 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 ERVK-11Q9UQG0 969 aa4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 TPRP12270 2363 aaKnown RBP4.66□□□□□ -1.66
HMGB3P5-201ENST00000428894 IGKV6D-41A0A0C4DH26 115 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms