RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 AGGF1Q8N302 714 aaeCLIP18.01■□□□□ 0.47
CHTOP-202ENST00000368687 MNS1Q8NEH6 495 aa18.01■□□□□ 0.47
CHTOP-202ENST00000368687 FOPNLQ96NB1 174 aa18.01■□□□□ 0.47
CHTOP-202ENST00000368687 PHACTR1Q9C0D0 580 aa18.01■□□□□ 0.47
CHTOP-202ENST00000368687 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.01■□□□□ 0.47
CHTOP-202ENST00000368687 SEMA5BQ9P283 1151 aa18.01■□□□□ 0.47
CHTOP-202ENST00000368687 ZC3H7BQ9UGR2 993 aaKnown RBP18.01■□□□□ 0.47
CHTOP-202ENST00000368687 KLHL3Q9UH77 587 aa18.01■□□□□ 0.47
CHTOP-202ENST00000368687 OR6C74A6NCV1 312 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 EFCAB7A8K855 629 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 A8MU76 341 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 MAP3K7O43318 606 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 RAD51CO43502 376 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 URI1O94763 535 aaPredicted RBP18■□□□□ 0.47
CHTOP-202ENST00000368687 S1PR4O95977 384 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 FGF3P11487 239 aaPredicted RBP18■□□□□ 0.47
CHTOP-202ENST00000368687 PKMP14618 531 aaKnown RBP18■□□□□ 0.47
CHTOP-202ENST00000368687 ITGB6P18564 788 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 ITIH1P19827 911 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 CHRM3P20309 590 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 FMO4P31512 558 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 SLC1A2P43004 574 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 MC2RQ01718 297 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 CTSL3PQ5NE16 218 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 BROXQ5VW32 411 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 C19orf48Q6RUI8 117 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 AMIGO1Q86WK6 493 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 DCUN1D3Q8IWE4 304 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 OR52E1Q8NGJ3 308 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 MAGEC3Q8TD91 643 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 KCNJ9Q92806 393 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 USP7Q93009 1102 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 DCBLD2Q96PD2 775 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 TRIM56Q9BRZ2 755 aaKnown RBP18■□□□□ 0.47
CHTOP-202ENST00000368687 HGH1Q9BTY7 390 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 RAB11FIP5Q9BXF6 653 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 LATS2Q9NRM7 1088 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 SLC39A1Q9NY26 324 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 OR6C2Q9NZP2 312 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 FBXO5Q9UKT4 447 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 CDYLQ9Y232 598 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 CRYL1Q9Y2S2 319 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 TEX264Q9Y6I9 313 aa18■□□□□ 0.47
CHTOP-202ENST00000368687 LOC400499M0QZD8 3231 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 IQCF5A8MTL0 148 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 C2orf74A8MZ97 194 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.99■□□□□ 0.47
CHTOP-202ENST00000368687 E7ESA3 106 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 STMND1H3BQB6 276 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 EIF3HO15372 352 aaKnown RBP eCLIP17.99■□□□□ 0.472e-8■■■■■ 30
CHTOP-202ENST00000368687 LIPCP11150 499 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 CCL4P13236 92 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 CCNFP41002 786 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 ELK3P41970 407 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 ABCG1P45844 678 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 LEPRP48357 1165 aaKnown RBP17.99■□□□□ 0.47
CHTOP-202ENST00000368687 IL11RAQ14626 422 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 MSS51Q4VC12 460 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 HSP90AA5PQ58FG0 334 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 BPHLQ86WA6 291 aaPredicted RBP17.99■□□□□ 0.47
CHTOP-202ENST00000368687 CNTN4Q8IWV2 1026 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 KRT222Q8N1A0 295 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 RAB42Q8N4Z0 105 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 BMPERQ8N8U9 685 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 OR4E2Q8NGC2 313 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 OR5AR1Q8NGP9 310 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 LKAAEAR1Q8TD35 194 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 KLHL6Q8WZ60 621 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 ART4Q93070 314 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 CERS2Q96G23 380 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 CORO1CQ9ULV4 474 aaPredicted RBP17.99■□□□□ 0.47
CHTOP-202ENST00000368687 SNX24Q9Y343 169 aa17.99■□□□□ 0.47
CHTOP-202ENST00000368687 PMS2P1A4D2B8 440 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 POLR1CO15160 346 aaPredicted RBP17.98■□□□□ 0.47
CHTOP-202ENST00000368687 PRAMEF10O60809 474 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 ZBTB11O95625 1053 aaPredicted RBP17.98■□□□□ 0.47
CHTOP-202ENST00000368687 NELFEP18615 380 aaKnown RBP17.98■□□□□ 0.47
CHTOP-202ENST00000368687 ARL4DP49703 201 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 CTBP1Q13363 440 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 STEAP4Q687X5 459 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 DUPD1Q68J44 220 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 LRRC8EQ6NSJ5 796 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 UGT3A1Q6NUS8 523 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 C8orf74Q6P047 294 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 FAM92BQ6ZTR7 304 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 DENND6AQ8IWF6 608 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 ZBTB2Q8N680 514 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 C2CD4AQ8NCU7 369 aaPredicted RBP17.98■□□□□ 0.47
CHTOP-202ENST00000368687 PHC3Q8NDX5 983 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 KIF18AQ8NI77 898 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 SKA2Q8WVK7 121 aaPredicted RBP17.98■□□□□ 0.47
CHTOP-202ENST00000368687 ZNF592Q92610 1267 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 SLC41A2Q96JW4 573 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 C1GALT1Q9NS00 363 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 IL1RAPL1Q9NZN1 696 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 POMT2Q9UKY4 750 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 LHX6Q9UPM6 363 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 CHMP2BQ9UQN3 213 aa17.98■□□□□ 0.47
CHTOP-202ENST00000368687 GSAPA4D1B5 854 aa17.97■□□□□ 0.47
CHTOP-202ENST00000368687 C9orf172C9J069 976 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms