RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 A0A1W2PQU0 124 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 RAD51BO15315 384 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 SNX2O60749 519 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 RNGTTO60942 597 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 LILRB5O75023 590 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 DCTN3O75935 186 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 C8GP07360 202 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 ENO2P09104 434 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 KITP10721 976 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TDGF1P13385 188 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 GABRG2P18507 467 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 MAPK9P45984 424 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 RPL14P50914 215 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 HK3P52790 923 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 CDK3Q00526 305 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 SP140Q13342 867 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 BOP1Q14137 746 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 FGL2Q14314 439 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 UNC50Q53HI1 259 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 HEATR4Q86WZ0 1026 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 BEND7Q8N7W2 519 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 TP53I13Q8NBR0 393 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 STON2Q8WXE9 905 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 NCSTNQ92542 709 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 GLMNQ92990 594 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 LENG8Q96PV6 779 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 TMEM120AQ9BXJ8 343 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TEX101Q9BY14 249 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 SLC17A9Q9BYT1 436 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 WWP1Q9H0M0 922 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 OR2AG1Q9H205 316 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 DOCK9Q9BZ29 2069 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3DA0A087WVF3 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3IA0A087WXS9 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3EA0A087X179 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3KA0A087X1G2 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3FA6NER0 549 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3LB9A6J9 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 MATN2O00339 956 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 SLC16A5O15375 505 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 FFAR2O15552 330 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 SUPT7LO94864 414 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 PAK4O96013 591 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 PCCBP05166 539 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 RPS17P08708 135 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3HP0C7X1 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 VCLP18206 1134 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TPMTP51580 245 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 AQP5P55064 265 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 PLOD1Q02809 727 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 KPNB1Q14974 876 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 ZNF658BQ4V348 819 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3GQ6DHY5 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3CQ6IPX1 549 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 METTL2BQ6P1Q9 378 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 KIAA1324Q6UXG2 1013 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 TBC1D3Q8IZP1 549 aaPredicted RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 AGAP11Q8TF27 550 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 ASB11Q8WXH4 323 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TMEM159Q96B96 161 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 LRRC37BQ96QE4 947 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 WDR26Q9H7D7 661 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 PNPOQ9NVS9 261 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 ZSCAN32Q9NX65 697 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 CD274Q9NZQ7 290 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 USP36Q9P275 1121 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 VTI1BQ9UEU0 232 aa11.81□□□□□ -0.52
USF1-203ENST00000368021 TNPO3Q9Y5L0 923 aaKnown RBP11.81□□□□□ -0.52
USF1-203ENST00000368021 SLC5A10A0PJK1 596 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 GFYI3L273 518 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 ZNF195O14628 629 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 SIX3O95343 332 aaPredicted RBP11.8□□□□□ -0.52
USF1-203ENST00000368021 APBB3O95704 486 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 IGLV3-19P01714 112 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 ZNF8P17098 575 aaPredicted RBP11.8□□□□□ -0.52
USF1-203ENST00000368021 MPSTP25325 297 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 CCR10P46092 362 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 ACADVLP49748 655 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 CDKL1Q00532 357 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 INPP5AQ14642 412 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 IRF4Q15306 451 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 PCBP2Q15366 365 aaKnown RBP eCLIP11.8□□□□□ -0.52
USF1-203ENST00000368021 LPAL2Q16609 132 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 ZNF528Q3MIS6 628 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 ANKS6Q68DC2 871 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 TRIM69Q86WT6 500 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 TRAPPC5Q8IUR0 188 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 RASGRP3Q8IV61 690 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 CAMKK1Q8N5S9 505 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 DENND6BQ8NEG7 585 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 OR2T34Q8NGX1 318 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 RLN3Q8WXF3 142 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 DLG3Q92796 817 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 FAR2Q96K12 515 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 SLC12A9Q9BXP2 914 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 BTBD1Q9H0C5 482 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 COG4Q9H9E3 785 aa11.8□□□□□ -0.52
USF1-203ENST00000368021 SGK2Q9HBY8 427 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms