RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 DNAJB13P59910 316 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 PRKCZQ05513 592 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 SIX1Q15475 284 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CPA6Q8N4T0 437 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CD99L2Q8TCZ2 262 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 WRAP53Q9BUR4 548 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 EFCAB11Q9BUY7 163 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 TRIT1Q9H3H1 467 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 TESMINQ9Y4I5 508 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 DGKBQ9Y6T7 804 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 NDUFS2O75306 463 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CLDN10P78369 228 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 ATG14Q6ZNE5 492 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 C2CD4AQ8NCU7 369 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 B3GALT6Q96L58 329 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 MTERF1Q99551 399 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 DERL2Q9GZP9 239 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CCSER2Q9H7U1 834 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 MTHFD1P11586 935 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 UGT1A6P19224 532 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 UGT1A1P22309 533 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 UGT1A4P22310 534 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 EDNRBP24530 442 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 UGT1A3P35503 534 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 UGT1A5P35504 534 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CCNFP41002 786 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 GPR17Q13304 367 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 FAM182AQ5T1J6 154 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 GPR65Q8IYL9 337 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 SPACA7Q96KW9 195 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC29A3Q9BZD2 475 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC32A1Q9H598 525 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 ITM2CQ9NQX7 267 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 ABCB8Q9NUT2 735 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CHURC1-FNTBB4DL54 471 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CCNB2O95067 398 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 PTPN5P54829 565 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 PRMT2P55345 433 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 NFKB2Q00653 900 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 HMGCS1Q01581 520 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 SPATS1Q496A3 300 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 KREMEN2Q8NCW0 462 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 PIWIL1Q96J94 861 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 TLE6Q9H808 572 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 PRR5P85299 388 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 OLIG2Q13516 323 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 GDF6Q6KF10 455 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 LRRC17Q8N6Y2 441 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 NPLOC4Q8TAT6 608 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 CLIP3Q96DZ5 547 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 YIPF1Q9Y548 306 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 GTPBP1O00178 669 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 HAS3O00219 553 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF12P17014 697 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 MAGEA11P43364 429 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 DLK2Q6UY11 383 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 LYSMD3Q7Z3D4 306 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 C2orf73Q8N5S3 287 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 DENND1AQ8TEH3 1009 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 PEX13Q92968 403 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 FEM1AQ9BSK4 669 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 EQTNQ9NQ60 294 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 TMEM248Q9NWD8 314 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 MOCS1Q9NZB8 636 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 VPS29Q9UBQ0 182 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 ENPP3O14638 875 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 DGKGP49619 791 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 RAB25P57735 213 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 BNC1Q01954 994 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 NDUFA5Q16718 116 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 PLA2G4EQ3MJ16 856 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 CARD16Q5EG05 197 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 TMEM126BQ8IUX1 230 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 GINS4Q9BRT9 223 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 COLEC10Q9Y6Z7 277 aa16.78■□□□□ 0.28
TRAPPC11-201ENST00000334690 UBE2QL1A1L167 161 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 TOP3BO95985 862 aaKnown RBP16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 ALDOAP04075 364 aaKnown RBP16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 CCR10P46092 362 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 CLK3P49761 638 aaKnown RBP16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 KCNQ1P51787 676 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 MS4A13Q5J8X5 152 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 BICRALQ6AI39 1079 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 PIM3Q86V86 326 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 OR2AP1Q8NGE2 309 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 OMA1Q96E52 524 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC39A3Q9BRY0 314 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 COPS4Q9BT78 406 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 PEX16Q9Y5Y5 336 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 IGKV6-21A0A0C4DH24 114 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 CDC7O00311 574 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC30A4O14863 429 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 MTTPP55157 894 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 ALG11Q2TAA5 492 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 FAM131AQ6UXB0 335 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 RBM23Q86U06 439 aaKnown RBP16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 GALNT13Q8IUC8 556 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF248Q8NDW4 579 aa16.77■□□□□ 0.28
TRAPPC11-201ENST00000334690 TSPEARQ8WU66 669 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms