RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 ZNF662Q6ZS27 426 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 PIANPQ8IYJ0 282 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 CLDN19Q8N6F1 224 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 OR52K1Q8NGK4 314 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 TFGQ92734 400 aaPredicted RBP18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 RANBP9Q96S59 729 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 GPR87Q9BY21 358 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 KCND1Q9NSA2 647 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 SPTBP11277 2137 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 SUV39H1O43463 412 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 IFNB1P01574 187 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 MSL3P1P0C860 447 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 POLR2CP19387 275 aaPredicted RBP18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 F8A1P23610 371 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 ADRA1DP25100 572 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 PPARGP37231 505 aaPredicted RBP18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 SEMA5AQ13591 1074 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 DEFB109BQ30KR1 87 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 MEI1Q5TIA1 1274 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 C16orf46Q6P387 395 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 C4orf22Q6V702 233 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 CCDC89Q8N998 374 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 SGSM3Q96HU1 749 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 FANCEQ9HB96 536 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 PIH1D1Q9NWS0 290 aaKnown RBP18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 PAK5Q9P286 719 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 MYO18BQ8IUG5 2567 aa18.54■□□□□ 0.56
CCDC28A-203ENST00000617445 CPNE3O75131 537 aaKnown RBP18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 CREG1O75629 220 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 OR56A5P0C7T3 313 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 CDH3P22223 829 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 PDHA2P29803 388 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 FOXN2P32314 431 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 DNASE1L3Q13609 305 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 BOP1Q14137 746 aaKnown RBP18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 CCNG2Q16589 344 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 TENM4Q6N022 2769 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 DRICH1Q6PGQ1 229 aaPredicted RBP18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 AFTPHQ6ULP2 937 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 TAB3Q8N5C8 712 aaPredicted RBP18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 MAIP1Q8WWC4 291 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 ZNF501Q96CX3 271 aaPredicted RBP18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 LRFN5Q96NI6 719 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 RAB6BQ9NRW1 208 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 SOHLH2Q9NX45 425 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 POLHQ9Y253 713 aa18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 DRG1Q9Y295 367 aaKnown RBP18.53■□□□□ 0.56
CCDC28A-203ENST00000617445 CCDC162PA2VCL2 907 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 GSAPA4D1B5 854 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 AP3B1O00203 1094 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 KATNA1O75449 491 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 TIAF1O95411 115 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 PRSS56P0CW18 603 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 PRDX3P30048 256 aaKnown RBP18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 ACVR1Q04771 509 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 CCDC38Q502W7 563 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 TSTD2Q5T7W7 516 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 AMIGO1Q86WK6 493 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 TMEM126BQ8IUX1 230 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 PHC3Q8NDX5 983 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 OR52E1Q8NGJ3 308 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 OR13J1Q8NGT2 312 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 C9orf43Q8TAL5 461 aaPredicted RBP18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 C1orf54Q8WWF1 131 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 PITPNM3Q9BZ71 974 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 CASS4Q9NQ75 786 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 POLG2Q9UHN1 485 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 MRPS18BQ9Y676 258 aaKnown RBP18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 KCNMB2Q9Y691 235 aa18.52■□□□□ 0.56
CCDC28A-203ENST00000617445 SLC9B1P1A6NJY1 282 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 C2orf74A8MZ97 194 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 KDM1AO60341 852 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 SCRG1O75711 98 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 WISP1O95388 367 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 NTRK1P04629 796 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 KLK3P07288 261 aaPredicted RBP18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 CCDC175P0C221 793 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 PREPP48147 710 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 ARCN1P48444 511 aaKnown RBP18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 RPS15P62841 145 aaKnown RBP18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 KCNC4Q03721 635 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 ERV3-1Q14264 604 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 TBC1D21Q8IYX1 336 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 OR4L1Q8NH43 312 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 CT55Q8WUE5 264 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 ELMO1Q92556 727 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 HDAC10Q969S8 669 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 TSSK1BQ9BXA7 367 aa18.51■□□□□ 0.55
CCDC28A-203ENST00000617445 PIPSLA2A3N6 862 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 CCDC78A2IDD5 438 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 BTN3A3O00478 584 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 BTN3A1O00481 513 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 GOT2P00505 430 aaKnown RBP18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 APRTP07741 180 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 ACADLP28330 430 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 SHMT2P34897 504 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 CSRP3P50461 194 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 PRAMEP78395 509 aa18.5■□□□□ 0.55
CCDC28A-203ENST00000617445 SNX1Q13596 522 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms