RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 PDGFDQ9GZP0 370 aaPredicted RBP14.4□□□□□ -0.1
VPS36-207ENST00000611132 KRCC1Q9NPI7 259 aaPredicted RBP14.4□□□□□ -0.1
VPS36-207ENST00000611132 TRPV5Q9NQA5 729 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 KLHL28Q9NXS3 571 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 ST3GAL5Q9UNP4 418 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 ERVK-11Q9UQG0 969 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 TCRBV5S1A1TA0A578 114 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PER2O15055 1255 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PAX3P23760 479 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 IFNGR2P38484 337 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 LEPRP48357 1165 aaKnown RBP14.4□□□□□ -0.1
VPS36-207ENST00000611132 ATL1Q8WXF7 558 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 FKBPLQ9UIM3 349 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 RAI2Q9Y5P3 530 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 ENPP3O14638 875 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 CASKO14936 926 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PAPSS2O95340 614 aaPredicted RBP14.4□□□□□ -0.1
VPS36-207ENST00000611132 SPATA31D3P0C874 917 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PCSK2P16519 638 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 RPL10P27635 214 aaKnown RBP14.4□□□□□ -0.1
VPS36-207ENST00000611132 BEX3Q00994 111 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 HMGCS1Q01581 520 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 COQ5Q5HYK3 327 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 SIRPB2Q5JXA9 342 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 C6orf136Q5SQH8 315 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PLEKHG7Q6ZR37 379 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 SPATA31D4Q6ZUB0 917 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 TP53INP2Q8IXH6 220 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 CSGALNACT1Q8TDX6 532 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 DIABLOQ9NR28 239 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 ADARB2Q9NS39 739 aaKnown RBP14.4□□□□□ -0.1
VPS36-207ENST00000611132 RNF6Q9Y252 685 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PCDHGA10Q9Y5H3 936 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 DNAJC15Q9Y5T4 150 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PTGDR2Q9Y5Y4 395 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 ADM5C9JUS6 153 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PDHXO00330 501 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 NIPSNAP2O75323 286 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 SNX4O95219 450 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 PTGER3P43115 390 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 CLCNKBP51801 687 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 CDH12P55289 794 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 GABARAPL2P60520 117 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 FBXO43Q4G163 708 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 ARRDC4Q8NCT1 418 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 ACBD6Q9BR61 282 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 NEK6Q9HC98 313 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 FAM118AQ9NWS6 357 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 CPA4Q9UI42 421 aa14.4□□□□□ -0.1
VPS36-207ENST00000611132 CCRL2O00421 344 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 SCAMP3O14828 347 aaKnown RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 ACOX3O15254 700 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 MPZL2O60487 215 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 CKMP06732 381 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 YES1P07947 543 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 FPR1P21462 350 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 SERPINA4P29622 427 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 PLA2G16P53816 162 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 OR4D2P58180 307 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 MXD1Q05195 221 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 GALNT1Q10472 559 aaPredicted RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 GRIK2Q13002 908 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 ZNF517Q6ZMY9 492 aaPredicted RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 ZNF534Q76KX8 674 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 CNIH3Q8TBE1 160 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 LGALS12Q96DT0 336 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 PYURFQ96I23 114 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 NECTIN3Q9NQS3 549 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 AGPAT4Q9NRZ5 378 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 OLAHQ9NV23 265 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 PAK1IP1Q9NWT1 392 aaPredicted RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 LCHNA4D1U4 455 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 MAGEB17A8MXT2 336 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 GGT5P36269 586 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 RPL3P39023 403 aaKnown RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 INHBCP55103 352 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 EMX2Q04743 252 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 USP39Q53GS9 565 aaKnown RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 LCN1P1Q5VSP4 162 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 UBE2R2Q712K3 238 aaPredicted RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 GALNT12Q8IXK2 581 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 CDCA5Q96FF9 252 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 NSUN5Q96P11 429 aaKnown RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 COPS8Q99627 209 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 CIPCQ9C0C6 399 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 INTS7Q9NVH2 962 aaKnown RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 PCDHGB3Q9Y5G1 929 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 PLSCR1O15162 318 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 TLR5O60602 858 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 NBNO60934 754 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 EFCAB14O75071 495 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 BCAS1O75363 584 aaPredicted RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 CAPN15O75808 1086 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 DHFRP00374 187 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 PGRP06401 933 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 CAPN3P20807 821 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 ST8SIA6P61647 398 aa14.39□□□□□ -0.11
VPS36-207ENST00000611132 MRPS6P82932 125 aaKnown RBP14.39□□□□□ -0.11
VPS36-207ENST00000611132 ZNF45Q02386 682 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms