RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TRAF2Q12933 501 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 COASYQ13057 564 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 CUL4AQ13619 759 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TFDP1Q14186 410 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TAF11Q15544 211 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HSPB2Q16082 182 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 SOWAHAQ2M3V2 549 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 RILPL1Q5EBL4 403 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HYIQ5T013 277 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HAUS3Q68CZ6 603 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TWF2Q6IBS0 349 aaKnown RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 C8orf82Q6P1X6 216 aaPredicted RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 MEPCEQ7L2J0 689 aaKnown RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 CATSPER4Q7RTX7 472 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HEATR4Q86WZ0 1026 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 GPR65Q8IYL9 337 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 KIAA2013Q8IYS2 634 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC39A11Q8N1S5 342 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLIP4Q8N3C7 705 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 RNF149Q8NC42 400 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 GJC3Q8NFK1 279 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 ERMNQ8TAM6 284 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 PRPF31Q8WWY3 499 aaKnown RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 ST8SIA4Q92187 359 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 SNAPC3Q92966 411 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM143Q96AN5 459 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 NAF1Q96HR8 494 aaKnown RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZNF558Q96NG5 402 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM175Q9BSA9 504 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HEMGNQ9BXL5 484 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 RAB34Q9BZG1 259 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 FZD8Q9H461 694 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 MINDY3Q9H8M7 445 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 C17orf75Q9HAS0 396 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 UBN1Q9NPG3 1134 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 SPG21Q9NZD8 308 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HSPB7Q9UBY9 170 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 NOL7Q9UMY1 257 aaKnown RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 PIN4Q9Y237 131 aaKnown RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TRIOO75962 3097 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 DENND4CQ5VZ89 1909 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZDBF2Q9HCK1 2354 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 A0A1B0GVC2 190 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PI4K2BG5E9Z4 385 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 CREB3O43889 395 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 TSPAN1O60635 241 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 TBX10O75333 385 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 CSDE1O75534 798 aaKnown RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 RGS11O94810 467 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ERLIN2O94905 339 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 AGR2O95994 175 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 HEXAP06865 529 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PRSS2P07478 247 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PLA2G2AP14555 144 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 IL9P15248 144 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 HOXB8P17481 243 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ARF4P18085 180 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 EDN2P20800 178 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 KCNA5P22460 613 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 TNFRSF8P28908 595 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 GJB2P29033 226 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PAFAH1B1P43034 410 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 NAMPTP43490 491 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 EFNA5P52803 228 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 HDAC4P56524 1084 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 MBTD1Q05BQ5 628 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 TRAF3Q13114 568 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 GIT2Q14161 759 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 VEPH1Q14D04 833 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PRICKLE4Q2TBC4 344 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ESCO2Q56NI9 601 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 SPOUT1Q5T280 376 aaKnown RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 NOTUMQ6P988 496 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 RRM2BQ7LG56 351 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ADGRD2Q7Z7M1 963 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 SPATA2LQ8IUW3 424 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 SFTPA2Q8IWL1 248 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ADHFE1Q8IWW8 467 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 THNSL1Q8IYQ7 743 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 RNF168Q8IYW5 571 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 MRPL43Q8N983 215 aaKnown RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 SMRP1Q8NCR6 262 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 SUSD6Q92537 303 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 KIFAP3Q92845 792 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 OTULINQ96BN8 352 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZC3HAV1LQ96H79 300 aaKnown RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 IGSF21Q96ID5 467 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC25A33Q9BSK2 321 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 TIPINQ9BVW5 301 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 C1QTNF1Q9BXJ1 281 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PAIP1Q9H074 479 aaKnown RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZBP1Q9H171 429 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 C2orf40Q9H1Z8 148 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 C20orf141Q9NUB4 165 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 TBC1D13Q9NVG8 400 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 PRMT7Q9NVM4 692 aaPredicted RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 CTNNAL1Q9UBT7 734 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 LRWD1Q9UFC0 647 aa3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 AGO1Q9UL18 857 aaKnown RBP3.66□□□□□ -1.82
CKS1BP3-201ENST00000600888 CARD8Q9Y2G2 431 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms